Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01553 ATGGCAGAGATTCAGTTGCCAGAAGGACAGATGAATGGTGGAGGAACACTGATGATTAACTCTAGCGAAGCGATCGGATCAAAACGTCAAAGGAGGCCGAGTGTCAGATTAGGTGACATCGGGGACCAGGCGTACGAATCGCATGTGCGTCGTAGCAACAAGCCATGGAAGCTCGGTGTTGATCACAGGAAGGACTCTAATGCATCAGGTAAAGCCTCAAAGACTCGACCTTTGATGAATTTGAGCTCTGGTGGTGCCGAGTTTAACGAAACCCTAGACGGTGATGATAGAGAAGGCAATTTGGATACTGTTGCGATTGGTAGTTGGAAAGTGAAAGAATCCAAGAAGAGAGGTTCCACGGCCACCAAAAGGGTCAGATCAAATTGGGTTCCCAGGATCGACGAAGGCGGTGGTGGCGCTGTTGGCGGAGGTGGAGGCGAAGGTGAGGAAAAATATAGTGCTGGCGAAGATATGGATGATGGGTACCGAGATTTTGAGATGGAAAATTCTGAAAGCCCGTTGAAAGAGCAAAGCCCTATTCGTTCTCTCGATAATTTGGCTGTTGACGGGCATGGGAATGACGGGGAGATGCACTATCAAGGGAATCGGAGATCCATTAGAGCTAGGCTTTCAGAGGGTAGGGACCATCATGATGGCGTTGAGTTATCTGGTCCATCTGATACTGATGCCAGGGATTGGAAATGTGGGGCTAGTGGGGATAGGAATGGGAATGGTGGAAGGGGTAGATGTGCAGAAGATGGGGTAAGGATTTGGCTTAATGGTTTAGGATTAGGTCGATATGCTCCAGTCTTTGAAATACATGAGGTGGATGACGAGGTGTTGCCAATGCTAACACTGGAGGATCTCAAAGATATGGGGATAAATGCAGTTGgctcaagaagaaaaatgtattGTGCAATCCAGAAGCTTGGGAAAGGGTTTTCATG 947 0.4731 MAEIQLPEGQMNGGGTLMINSSEAIGSKRQRRPSVRLGDIGDQAYESHVRRSNKPWKLGVDHRKDSNASGKASKTRPLMNLSSGGAEFNETLDGDDREGNLDTVAIGSWKVKESKKRGSTATKRVRSNWVPRIDEGGGGAVGGGGGEGEEKYSAGEDMDDGYRDFEMENSESPLKEQSPIRSLDNLAVDGHGNDGEMHYQGNRRSIRARLSEGRDHHDGVELSGPSDTDARDWKCGASGDRNGNGGRGRCAEDGVRIWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGINAVGSRRKMYCAIQKLGKGFS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01553 315 PANTHER - 23 315 - -
Bva06g01553 315 MobiDBLite consensus disorder prediction 71 87 - -
Bva06g01553 315 ProSiteProfiles SAM domain profile. 250 313 IPR001660 GO:0005515
Bva06g01553 315 SMART SAM_4 247 313 IPR001660 GO:0005515
Bva06g01553 315 SUPERFAMILY SAM/Pointed domain 252 310 IPR013761 -
Bva06g01553 315 MobiDBLite consensus disorder prediction 1 100 - -
Bva06g01553 315 CDD SAM_superfamily 255 309 - -
Bva06g01553 315 PANTHER SCP160 23 315 - -
Bva06g01553 315 Gene3D - 250 310 IPR013761 -
Bva06g01553 315 MobiDBLite consensus disorder prediction 211 246 - -
Bva06g01553 315 MobiDBLite consensus disorder prediction 14 28 - -
Bva06g01553 315 MobiDBLite consensus disorder prediction 43 70 - -
Bva06g01553 315 Pfam SAM domain (Sterile alpha motif) 254 310 IPR001660 GO:0005515
Bva06g01553 315 MobiDBLite consensus disorder prediction 211 236 - -
Bva06g01553 315 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01553 Bva-Chr6 11118353 11120038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01553 - - mcha:111007101 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01553 06 11118353 11120038 Bva05g00205 05 1024862 1027859 ECH
Bva06g01553 06 11118353 11120038 Bva06g01553 06 11118353 11120038 ECH