Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00205 ATGGCAGAGATTCAGTTACCAGAGGGCCAGATGAACGGTGGAGGAACACTGATGATTAACTCAAGCGAAGCCGTCGGATCGAAGCGTCAAAGGAGGCCGAGCGTCAGATTAGGTGACATCGGGGACCAGCCGTACGATTCGCATGTGCGTCGGAGCAACAAGTCGTGGAAGCTCGGTCTTGATCACAGGAAGGACTCCAATGCATCAGGTAAAGCCTCAAAGACTCGAGCTTTGATGAATTTGAGTTCTGGAGGTGGTGGTGCCGAGTTTAACGAAACCCTAGAGGGTGGTGACAAAGAAGGGAGTTTGGATACTGTTGCGATTGGTAGCTGGAAAGTGAAAGAATCGAAGAAGAGAGGTTCCACGGCCACCAAGAGGGTCAGATCAAATTGGGTTCCTAGGATCGATGAAGGCgggggtggtggtggtggcggCGAAGGTGAGGAGAAGTATAGTGCTGGTGAAGATATGGATGATGGCTACCGAGATTTTGAGATGGAAAATTCTGAAAGCCCTTTGAAAGAACAAAGCCCACTTCATTCTCTCGACAATTTGGCTGTTGACGGGCATGGGAATGACAGGGAGATGCACTATCACGGGAATAGAAGATCCATTAGAGCTAGGGTTTCAGAGGATAGGGACCATCATGATGGCGTTGAGTTATCTGGCCCATCTGATACAGATGCGAGGGATTGGAAATGTGGGGATGGGAATGGGAATGGTGGAAGAGCTAGGTGTGGAGAAGATGGGGTAAGGATTTGGCTGAATGGATTAGGATTAGGTCGATATGCTCCAGTCTTTGAAATACATGAGGTGGATGACGAGGTTCTGCCAATGTTAACACTGGAGGATCTCAAAGATATGGGGATAAATGCGGTTGGTTCTAGAAGAAAAATGTACTGTGCCATTCAGAAGCTTGGGAAAGGGTTTTCATG 935 0.4706 MAEIQLPEGQMNGGGTLMINSSEAVGSKRQRRPSVRLGDIGDQPYDSHVRRSNKSWKLGLDHRKDSNASGKASKTRALMNLSSGGGGAEFNETLEGGDKEGSLDTVAIGSWKVKESKKRGSTATKRVRSNWVPRIDEGGGGGGGGEGEEKYSAGEDMDDGYRDFEMENSESPLKEQSPLHSLDNLAVDGHGNDREMHYHGNRRSIRARVSEDRDHHDGVELSGPSDTDARDWKCGDGNGNGGRARCGEDGVRIWLNGLGLGRYAPVFEIHEVDDEVLPMLTLEDLKDMGINAVGSRRKMYCAIQKLGKGFS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00205 311 PANTHER - 23 311 - -
Bva05g00205 311 MobiDBLite consensus disorder prediction 209 232 - -
Bva05g00205 311 MobiDBLite consensus disorder prediction 1 102 - -
Bva05g00205 311 SUPERFAMILY SAM/Pointed domain 247 306 IPR013761 -
Bva05g00205 311 CDD SAM_superfamily 251 305 - -
Bva05g00205 311 Gene3D - 246 306 IPR013761 -
Bva05g00205 311 PANTHER SCP160 23 311 - -
Bva05g00205 311 MobiDBLite consensus disorder prediction 14 28 - -
Bva05g00205 311 MobiDBLite consensus disorder prediction 114 153 - -
Bva05g00205 311 MobiDBLite consensus disorder prediction 43 70 - -
Bva05g00205 311 Pfam SAM domain (Sterile alpha motif) 250 306 IPR001660 GO:0005515
Bva05g00205 311 ProSiteProfiles SAM domain profile. 249 309 IPR001660 GO:0005515
Bva05g00205 311 SMART SAM_4 243 309 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00205 Bva-Chr5 1024862 1027859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00205 - - mcha:111007101 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01553 06 11118353 11120038 Bva05g00205 05 1024862 1027859 ECH
Bva05g00205 05 1024862 1027859 Bva05g00205 05 1024862 1027859 ECH