Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01540 ATGTTTTCCATTACATACTATGCCAGTAACACCAGGTTGTTCCAGCTTGCACTCTGCATGACATTTGGAGGAAACGCCATCTCCTTTATGGTGTACCTTGCGCCATTGCCGACATTTTACCTtgtttacaagaaaaaatccACTGAAGCGTTTCAGTCAATTCCTTATGTTGTTGCGCTCTTCAGTTCTATGCTTTGGATTTACTACGCACTCGTCAAGAAGGACGATAGCCTTCTTCTCATCACCATCAACTCCTTTGGCTGTGTCATAGAATCAATCTACCTTGCCATATTCCTCTTTTATGCCCCAAATAAGGCTAGGCTTTCGACCATTAAGCTTCTTCTGGTGCTGAATGTGTTTGGATTCGGAGCGATGCTTTTGTCAACTCTATACCTGACAGAGGGAACAAAACGCCTCCATGTTATAGGCTGGATTTGCCTCGTTTTTAACATTTGCGTATTTGCCGCTCCGCTTGGGATTCTGAGACGAGTTATAAAGACAAAGAGCGTGGAATACGTGCCCTTGTCTTTGTCATTCTTTTTGACCTTGAATGCTGTCATGCGGTTCTTCAATGGCCTTTTCCTCAAAGGCTACTACATCGCCCTCCCGAACATAGTCGGTTTGACATTCGGGATGATTCAGATGGTACTGTATGCAATGTACAGAAAGAGCACGCCCGTACAGGACCAGAAGCTCCCAGAACACAAAGGGGACATTGAAAATGGCGTCGTTAACGTGGTGACTGACGAGAAATTGGAAGTGAGCACCCAGCCCTGCGATATCGAGATCGCAGAGAAGAAGCAAGACCAGGCTGCAGATCAGACTGGTAACgagaaaacagaagaaaacaagaatgaGGAGAAAAGAGGGGAAGGCTTCCCTCAGGAACAAGGCGTAAGTTGCCAAGTTCGATTGACACTTGATTGTACCGCGCGTCTTGTGCCTCTGcgactctctctctctctctctctgtcacCCGTGCGTGTAAGATTTGTAAAACAGGTTTA 1007 0.431 MFSITYYASNTRLFQLALCMTFGGNAISFMVYLAPLPTFYLVYKKKSTEAFQSIPYVVALFSSMLWIYYALVKKDDSLLLITINSFGCVIESIYLAIFLFYAPNKARLSTIKLLLVLNVFGFGAMLLSTLYLTEGTKRLHVIGWICLVFNICVFAAPLGILRRVIKTKSVEYVPLSLSFFLTLNAVMRFFNGLFLKGYYIALPNIVGLTFGMIQMVLYAMYRKSTPVQDQKLPEHKGDIENGVVNVVTDEKLEVSTQPCDIEIAEKKQDQAADQTGNEKTEENKNEEKRGEGFPQEQGVSCQVRLTLDCTARLVPLRLSLSLSLSPVRVRFVKQV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01540 335 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 16 255 - -
Bva06g01540 335 PANTHER RAG1-ACTIVATING PROTEIN 1 16 255 - -
Bva06g01540 335 MobiDBLite consensus disorder prediction 265 293 - -
Bva06g01540 335 Gene3D - 17 106 - -
Bva06g01540 335 Pfam Sugar efflux transporter for intercellular exchange 141 224 IPR004316 GO:0016021
Bva06g01540 335 Pfam Sugar efflux transporter for intercellular exchange 24 105 IPR004316 GO:0016021
Bva06g01540 335 Gene3D - 137 231 - -
Bva06g01540 335 MobiDBLite consensus disorder prediction 265 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01540 Bva-Chr6 11060989 11063110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01540 15 288 Miscellaneous Gene Families AT5G50790 47.222 4.28e-85 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01540 K15382 - gmx:100810962 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01540 06 11060989 11063110 Bva05g00214 05 1068770 1070621 ECH
Bva06g01540 06 11060989 11063110 Bva06g01540 06 11060989 11063110 ECH