Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00214 ATGGGTAGCCCCttgattttggtctttggTATTCTAGGTAACATTGCCTCTTTCGTGTGCTTCCTGGCACCACTACCGACATTTTACAGAGTGTGTAAGAAGAAATCAACAGAAGGGTTTCAATCAGTTCCGTATGTGGCGGCACTCTTCTGTGCAACGCTTTGGATTTTCTATGCCTATATCAAGACCGGAGAAATGCTTATTATCACCATTAACTCATTCGGTTGTTTTATTGAGACAGTTTACCTTGCCATCTATATCACTTACTGTCCCAAGAAAGCCAGGATTTTCACATTAACGCTGATTCTGTTGGCCAACTTCGGGGGATTTTGCACGATTGTCCTCGTAACTCACGTCCTGGAGAAAGCCAGATCAGAACGTCTCAAGCTTCTTGGTTGGATTTGCGTCGTGTGTTCTACCAGTGTTTTCGCAGCACCTCTGAGCATTATCAAAACTGTGATTCGCACCAAGAGCGTAGAATACATGCCCTTCACTCTCTCATTCCTCCTCACAGTAAGCGCCATTATGTGGCTTTTATACGGTGTTTTCCTCGGAGATATGTATGTTGCACTCCCCAACATAGTTGGTGTCACATTCGGGACCATTCAGATGGTATTGTATGCAATTTACAAAAACAGCAAAGCCGCGCAGGATCAGAAGCTCCCAGAACACAAAGGGGATGTTGAAAACGGCCTCGTCACAACTGTCACTGACGAGAAATTGGAAGTAAACACCCAGCCCTGCGATGCCGAGATTGCAGAGAGGAAGGAACAGGAACTGGAACAGATTGCTaaagaacaaaacaacaagaagaaaacaggAGGAAGGCTTCCCTG 836 0.4342 MGSPLILVFGILGNIASFVCFLAPLPTFYRVCKKKSTEGFQSVPYVAALFCATLWIFYAYIKTGEMLIITINSFGCFIETVYLAIYITYCPKKARIFTLTLILLANFGGFCTIVLVTHVLEKARSERLKLLGWICVVCSTSVFAAPLSIIKTVIRTKSVEYMPFTLSFLLTVSAIMWLLYGVFLGDMYVALPNIVGVTFGTIQMVLYAIYKNSKAAQDQKLPEHKGDVENGLVTTVTDEKLEVNTQPCDAEIAERKEQELEQIAKEQNNKKKTGGRLP 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00214 278 Gene3D - 126 216 - -
Bva05g00214 278 Gene3D - 6 94 - -
Bva05g00214 278 PANTHER RAG1-ACTIVATING PROTEIN 1 4 272 - -
Bva05g00214 278 Coils Coil 250 273 - -
Bva05g00214 278 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016021
Bva05g00214 278 Pfam Sugar efflux transporter for intercellular exchange 8 94 IPR004316 GO:0016021
Bva05g00214 278 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 272 - -
Bva05g00214 278 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00214 Bva-Chr5 1068770 1070621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00214 8 259 Miscellaneous Gene Families AT5G23660 52.830 1.04e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00214 K15382 - gmx:100810426 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01540 06 11060989 11063110 Bva05g00214 05 1068770 1070621 ECH
Bva05g00214 05 1068770 1070621 Bva05g00214 05 1068770 1070621 ECH