Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01528 ATGCTATTGAGCTCAAAGTTGTGGTTCATCTTAGGGAACCTCATAATTGTTGTGCTTGTGGTGGATTGGGCCTGCAGATTCTTTTATGTAACTGCACCAGGAATTGCAGCAACCGAAGCCTACAGCAAGAAGATTTTGGATGCCTCTGGAGCCAAGAAACTCTTCTATCCCCCATCCATCCAATCTCCCGAGGTTGTGTGCAAAGAAAATTTGGCAAGAAAGGTAGTACTGATCACCGGAGCAGCCTCAGGCATAGGCGAGCAACTTGCATATGAGTACGCCAGGCGAGGAGCATTTCTGTCCCTCGTCGACATTAGAGAGGACAATCTCGGAGCAGTCACTGACAAGGCACGTTCTCTTGGTTCTCCTCAAGTTATCACCATAGGTGCTGATGTCACCAAGGTCCAAGACTGTAAGCAGTTTGTTGATGAAACTGTGAATCACTTTGGACGATTGGATCATTTGGTAAACAATGCTGGCATTCTTAGAAGTGAATCTGTCGAGAAATTCGAAGATGTTTCTTTAGTAATTCCAATGATGGATATCAACTTCTGGGGAGCAGTTTATGGCACTTTATTTGCAATTCCACACCTGAAAAGCAGCGAAGGGAAGGTGGTGGTGGTTGCTTCAGCTGCTGGATGGTATCCAGTTCCACGATTGAGTATCTACAACGCAAGCAAGGCAGCGGTTATAAGTTTCTTCGAAACACTAAGAATTGAACTTGGTTGGGCTATTGGCATAACAATTATTACTCCCGGTGTCATTAGAACTCCTCTGGCAACTGCCCAAACTGAAGCAATGGGTAGGATGGGATTTATTCCAATGGAGACAGCAAGTGAATGTGCAAAGGCAATCGTGGAGAGTGCGAGCAGGGGAGATATGCGAGGAGCAATTCTGTCCCTCGTCGACATTAGAGAGGACAATCTTGGAACAGTTGCTGACAAGGCACGTTCTCTGGGTTCCCCTCAAGTTATCACCATAGGTGCTGATGTCACCAAGGTCCAAGACTGCAAGCAGTTTGTGGATGAAACTGTGAATCACTTTGGACGATTGAACCATTTGGTCAACAATGCTGGCATTATTAGATGTGGAACGGTCGAGAACGTTACAGATGTTTCTTTAGTAACTCCAGTCATGGATGTAAATTTCTGGGGAGCAGTTTATGGCACTCTATTCGCAATTCCACACTTGAAAAGCAGCAAAGGGAAGGTGGTGATGATTGCTTCAAGTGCCGCCTGGTATCCACTTCCACGATTGAGTATCTACAATGCAAGCAAGGCAGCGGccataaatttctttgaaacACTAAGAGCTGAACTTGGTTGGGCTATTGGCGTAACCATTGTTACTCCCGGTGTCATTAAGACTCCTCTAGCAGATCCCCAAACTCAAGCAAAGGCTAGGATGGGATTTATTCCAATGGAGACAGCAGGTGAATGTGCAAAGGCAATCGTGAAGGGTGTCTGCAGGGGAGACATGTACGTGACAGAGCCATCATGGGTCAAGGTGTTCTATCATTTGAAGCTGCTTTTTCCTGAAGTCGTGGACTTTGGCAACCGCCTTGCCTTCAGATTCGGCTATGCAGATGCATTGCAGTTTAGTAAATTGTCTGTCTGCAAGATGAGTGCTGACAAGGCACGTTCTCTGGGTTCCCCTCAAGTTATCACCATAGGTGCTGATGTCACCAAGGTCCAAGACTGCAAGCAGTTTGTGGATGAAACTGCGAATCACTTTGGACGATTGGATCATTTGGTAAACAATGCTGGCATTCTTAGAAGTGAAGCGGTCGAGGATATTGTCGAAGATGTTTCTACAGTAACTCCCATGATGGATATTAATTTCTGGGGAGCTGTTTATGGCACTCTATTTGCAATTCCACACTTGAAAAGCAGCAAAGGGAAGGCGGTGGTGGTTGCTTCAGGTTGCGGATGGTTTCCAATTCCGCGATTGAGTATCTATAATGCAAGCAAGGCAGCGGctataaatttctttgaaacACTGAGAATAGAACTTGGTTGGGTTATTGGCATAACCATTGTTACTCCCGGGGTCATTGAAACTCCTCTCGTAAATACCCAAACTCAAGCAAAGGCTAGGCTGGGATTTATTCCAATGGGGACAGCAAGTGAATGTGCAAAGGCAATCGTGGAGGGTGTCTGCAGGGGAGATATGTACGTGACAGAGCCATCATGGGTCAAAGTGTTTCATCCTTGGAAGATGCTTTTTCCTGAAGCCTTGGACTTCGCCAGCCGCGTTGTCTTCGGATTGGATCATTTGGTAAACAATGCTGGCATTCTTAGAAGTGAGGCGGTCGAGAATATTGTCCAAGATGTTTCTTCAGCAAGTAAGGCAGCGGctataaatttgtttgaaaCACTAAGAACTGAACTTGGTTGGGATATTGGCATAACTATTATCACTACTGACGTTTCAAGTGTCCAAGATTGCAAGAGATTCGTTGACATAGCAGTGAACCACTTTGGACGATtGGATCATCTGGTGAACAATGCCGGAATAGTTCCAATGTGCTTGTTTGAAGATATCACTGATATCACTAAGCTTGCACCCGTAATGGACATCAACTTCTGGGGTCAGGTATATGGAATATATTTTGCAATTCCCCACCTCAGAAAAAGCAAAGGCAAGATCATAGGCATAACTTCCTCTTCCGGATGGTTGCCTGCTCCAAGGTTGAGCTTCTACAACGCAAGCAAGGCAGCATTAATAAGCCTATATGAATGTCTGAGAAGTGAATTGGGAAGTAAGATAGGAATAACTATAGTCACACCAGGGTTGATTGAGCCAGAAATGACCCAAGGGAAGTTCCTATCCAAGGAAGGTCaaatgattcttgaccaagaAATGAGAGATgTTGAAATGACTTCGGTGCCAGTAAAATCGGTGACAGCAGCTGCTAAAGCAATCGTGAATTGCGCATGCCGTGGAGACCCGTATTTAACAGAACCAGCATGGGTTAGTACcacattttatttcaagatACTTTGTCCTGAAATAGTGGAACGGAGCAATCGCTTGGTACTGATCCCTGCGTCTTCAAAGTCAGAGACTGAGACAGGGAGGAATACAAATACAATTAGCAAGAGGCTTCTCGATCTCAGCGGCTTAAAGAAATATCTCTACCCCGGATCAATCAGAAGCCCCCATCTCAAGTCCACATA 3179 0.4439 MLLSSKLWFILGNLIIVVLVVDWACRFFYVTAPGIAATEAYSKKILDASGAKKLFYPPSIQSPEVVCKENLARKVVLITGAASGIGEQLAYEYARRGAFLSLVDIREDNLGAVTDKARSLGSPQVITIGADVTKVQDCKQFVDETVNHFGRLDHLVNNAGILRSESVEKFEDVSLVIPMMDINFWGAVYGTLFAIPHLKSSEGKVVVVASAAGWYPVPRLSIYNASKAAVISFFETLRIELGWAIGITIITPGVIRTPLATAQTEAMGRMGFIPMETASECAKAIVESASRGDMRGAILSLVDIREDNLGTVADKARSLGSPQVITIGADVTKVQDCKQFVDETVNHFGRLNHLVNNAGIIRCGTVENVTDVSLVTPVMDVNFWGAVYGTLFAIPHLKSSKGKVVMIASSAAWYPLPRLSIYNASKAAAINFFETLRAELGWAIGVTIVTPGVIKTPLADPQTQAKARMGFIPMETAGECAKAIVKGVCRGDMYVTEPSWVKVFYHLKLLFPEVVDFGNRLAFRFGYADALQFSKLSVCKMSADKARSLGSPQVITIGADVTKVQDCKQFVDETANHFGRLDHLVNNAGILRSEAVEDIVEDVSTVTPMMDINFWGAVYGTLFAIPHLKSSKGKAVVVASGCGWFPIPRLSIYNASKAAAINFFETLRIELGWVIGITIVTPGVIETPLVNTQTQAKARLGFIPMGTASECAKAIVEGVCRGDMYVTEPSWVKVFHPWKMLFPEALDFASRVVFGLDHLVNNAGILRSEAVENIVQDVSSASKAAAINLFETLRTELGWDIGITIITTDVSSVQDCKRFVDIAVNHFGRLDHLVNNAGIVPMCLFEDITDITKLAPVMDINFWGQVYGIYFAIPHLRKSKGKIIGITSSSGWLPAPRLSFYNASKAALISLYECLRSELGSKIGITIVTPGLIEPEMTQGKFLSKEGQMILDQEMRDVEMTSVPVKSVTAAAKAIVNCACRGDPYLTEPAWVSTTFYFKILCPEIVERSNRLVLIPASSKSETETGRNTNTISKRLLDLSGLKKYLYPGSIRSPHLKST 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01528 1059 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 295 523 - -
Bva06g01528 1059 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 780 807 - -
Bva06g01528 1059 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 542 754 - -
Bva06g01528 1059 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 806 1020 - -
Bva06g01528 1059 Gene3D - 293 525 - -
Bva06g01528 1059 Gene3D - 59 292 - -
Bva06g01528 1059 Gene3D - 800 1014 - -
Bva06g01528 1059 Gene3D - 535 754 - -
Bva06g01528 1059 PANTHER RETINOL DEHYDROGENASE-RELATED 295 523 - -
Bva06g01528 1059 PANTHER RETINOL DEHYDROGENASE-RELATED 542 754 - -
Bva06g01528 1059 PANTHER RETINOL DEHYDROGENASE-RELATED 806 1020 - -
Bva06g01528 1059 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 543 748 IPR036291 -
Bva06g01528 1059 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 409 437 IPR020904 GO:0016491
Bva06g01528 1059 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 640 668 IPR020904 GO:0016491
Bva06g01528 1059 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Bva06g01528 1059 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 161 IPR002347 -
Bva06g01528 1059 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 211 IPR002347 -
Bva06g01528 1059 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 888 916 IPR020904 GO:0016491
Bva06g01528 1059 PRINTS Glucose/ribitol dehydrogenase family signature 75 92 IPR002347 -
Bva06g01528 1059 PRINTS Glucose/ribitol dehydrogenase family signature 150 161 IPR002347 -
Bva06g01528 1059 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Bva06g01528 1059 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Bva06g01528 1059 PRINTS Glucose/ribitol dehydrogenase family signature 197 213 IPR002347 -
Bva06g01528 1059 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 69 293 IPR036291 -
Bva06g01528 1059 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 295 517 IPR036291 -
Bva06g01528 1059 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 65 294 - -
Bva06g01528 1059 PANTHER RETINOL DEHYDROGENASE-RELATED 780 807 - -
Bva06g01528 1059 PANTHER RETINOL DEHYDROGENASE-RELATED 65 294 - -
Bva06g01528 1059 Pfam short chain dehydrogenase 544 696 IPR002347 -
Bva06g01528 1059 Pfam short chain dehydrogenase 803 941 IPR002347 -
Bva06g01528 1059 Pfam short chain dehydrogenase 74 265 IPR002347 -
Bva06g01528 1059 Pfam short chain dehydrogenase 295 465 IPR002347 -
Bva06g01528 1059 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 210 238 IPR020904 GO:0016491
Bva06g01528 1059 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 789 1006 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01528 Bva-Chr6 10983384 10996191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01528 809 938 Acyl Lipid Metabolism Gene Families AT1G24360 29.545 1.08e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01528 K22418 - egr:104427794 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01528 06 10983384 10996191 Bva05g00226 05 1112249 1113357 ECH
Bva06g01528 06 10983384 10996191 Bva06g01528 06 10983384 10996191 ECH