Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00226 ATGTGGCCGGCAAAGTTGTCCTCATTACAGCATTTGGCATACGAGCATGCCACGAGAGGTGCTTGCTTAGCACTTTGTGCACGGAGACACAAATCACTTGGCCAAGTTGCTGATACAGCGTGCCAATATGGTTCTCCCAAAGTTGTTGCAATTCCTGCAGATGTTTCCAACGTCGATGACTGTAAGAGACTCGTTGAAGAAACTGTAAATCATTTTGGAAGATTGGACCATCTGGTAAATAATGCTGGAATCTCCACCGGAGCTATGTTTGAAGAGGCAACtgatataacaaattttagacCCATAATGGAAACAAACTTCTGGGGACCGGTGTACACAACTCATTTTGCTTTACCTTACCTGAGAAGGAGCAAAGGCAAAATCGTAGTGATGTCTTCTCCCGAAGCTTGGTTGCCGACTCCTAGAACAGCCGTCTACAGTGCAAGCAAATTGGGGCTGGAGATTTTCTATGACTCGTTGGGAGGGACATACACATA 497 0.4447 MWPAKLSSLQHLAYEHATRGACLALCARRHKSLGQVADTACQYGSPKVVAIPADVSNVDDCKRLVEETVNHFGRLDHLVNNAGISTGAMFEEATDITNFRPIMETNFWGPVYTTHFALPYLRRSKGKIVVMSSPEAWLPTPRTAVYSASKLGLEIFYDSLGGTYT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00226 165 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 IPR002347 -
Bva05g00226 165 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 IPR002347 -
Bva05g00226 165 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 IPR002347 -
Bva05g00226 165 Gene3D - 10 164 - -
Bva05g00226 165 PANTHER RETINOL DEHYDROGENASE-RELATED 9 160 - -
Bva05g00226 165 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 161 IPR036291 -
Bva05g00226 165 Pfam short chain dehydrogenase 12 161 IPR002347 -
Bva05g00226 165 PRINTS Glucose/ribitol dehydrogenase family signature 146 165 IPR002347 -
Bva05g00226 165 PRINTS Glucose/ribitol dehydrogenase family signature 73 84 IPR002347 -
Bva05g00226 165 PRINTS Glucose/ribitol dehydrogenase family signature 120 136 IPR002347 -
Bva05g00226 165 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE 1B-LIKE ISOFORM X1 9 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00226 Bva-Chr5 1112249 1113357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00226 11 123 Acyl Lipid Metabolism Gene Families AT3G12800 30.088 1.64e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00226 K22418 - tcc:18605140 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01528 06 10983384 10996191 Bva05g00226 05 1112249 1113357 ECH
Bva05g00226 05 1112249 1113357 Bva05g00226 05 1112249 1113357 ECH