LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g01526	ATGGGAGAGgaagaaaagaaacccgaacaagagagaatggaagagaagaaagcagAGGAACCCAAGGCGGCAGCAGAGGACAAGAAGGAAGAAGCGGGACAGCCAGAAAAGGCGGCGGAAGAGAAAAAACCGGAGGAATCAAAAGAtggaaaagaagcaaaagaccAACCTCCGCCGCCACCTCCAGAAATTGTGCTTAAAGTGTACATGCATTGCGAAGGTTGTGCCCGCAAGGTTCGTCGCTCCCTTAAAGGATTCCAAGGTGTTGAAGATGTCATCACAGATTGCAAAACATCCAAGGTGATTGTTAAGGGAGAAAAGGCTGATCCGTTGAAGGTTCTGGAGAGAGTACAGAGGAAGAGCCATAGACAGGTTGAGCTTCTCTCACCGATCCCAAAACCACCGCCGCaaccagaagagaaaaaacCCGAAGAGGAGAAGCCCAAGactgaagagaaaaaagaagagATCATCACAGTTGTTCTGAAAGTTCACATGCATTGCGAAGCTTGCGCATTGGAAATCAAGAGACGCATAGAGAGAATGAAAGGGGTTGAATCAGCAGAACCCGATCTAAAGAACTCACAAGTGAGCGTGAAGGGTGTGTTTGATCCACCGAAGCTGGTTGAATTCGTGTACAAGCGAACCGGAAAGCATGCAGTGATCGCGAAGCAAGAgccagagaagaaagaagagaaaacagaggaagggaaggagaagaaagggGAAGAAGGTGGCGAGAAAGAGAACAAGAGTAACGGTGAAGCTGAAGgtgaagagaagaaggaaaagaaaggcgGCAAACCCGACGGCGTTGAAGTAGGCACCGTGGAAGAGACACAGACAAAGGTGGTAGAACTGAAAAGGAGCGAATACTACTATTACCCTCCGACGTATGCCATGGAAATGTATGCCTACCCACCTCAGATCTTCAGCGATGAGAATCCAAATGCCTGTTCTGTCATGTATGCCTACCCACCTCAGATCTTCAGCGACGAGAATCCAAATGCCTGTTCtgtcatgta	1025	0.4029	MGEEEKKPEQERMEEKKAEEPKAAAEDKKEEAGQPEKAAEEKKPEESKDGKEAKDQPPPPPPEIVLKVYMHCEGCARKVRRSLKGFQGVEDVITDCKTSKVIVKGEKADPLKVLERVQRKSHRQVELLSPIPKPPPQPEEKKPEEEKPKTEEKKEEIITVVLKVHMHCEACALEIKRRIERMKGVESAEPDLKNSQVSVKGVFDPPKLVEFVYKRTGKHAVIAKQEPEKKEEKTEEGKEKKGEEGGEKENKSNGEAEGEEKKEKKGGKPDGVEVGTVEETQTKVVELKRSEYYYYPPTYAMEMYAYPPQIFSDENPNACSVMYAYPPQIFSDENPNACSVM	341

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g01526	341	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	322	IPR044577	GO:0046872
	Bva06g01526	341	Gene3D	-	154	223	-	-
	Bva06g01526	341	ProSiteProfiles	Heavy-metal-associated domain profile.	166	212	IPR006121	GO:0046872
	Bva06g01526	341	SUPERFAMILY	HMA, heavy metal-associated domain	64	120	IPR036163	GO:0046872
	Bva06g01526	341	Pfam	Heavy-metal-associated domain	67	119	IPR006121	GO:0046872
	Bva06g01526	341	Pfam	Heavy-metal-associated domain	162	214	IPR006121	GO:0046872
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	1	65	-	-
	Bva06g01526	341	SUPERFAMILY	HMA, heavy metal-associated domain	156	225	IPR036163	GO:0046872
	Bva06g01526	341	CDD	HMA	70	126	IPR006121	GO:0046872
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	222	272	-	-
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	1	56	-	-
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	222	277	-	-
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	119	153	-	-
	Bva06g01526	341	ProSiteProfiles	Heavy-metal-associated domain profile.	70	126	IPR006121	GO:0046872
	Bva06g01526	341	CDD	HMA	161	220	IPR006121	GO:0046872
	Bva06g01526	341	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	322	-	-
	Bva06g01526	341	MobiDBLite	consensus disorder prediction	137	153	-	-
	Bva06g01526	341	Gene3D	-	61	133	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g01526	Bva-Chr6	10974032	10976108	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g01526	-		-	pvy:116106898	323.939

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g01526	06	10974032	10976108	Bva05g00231	05	1128774	1130821	ECH
	Bva06g01526	06	10974032	10976108	Bva06g01526	06	10974032	10976108	ECH