Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01496 ATGGCAACGATGCAAGACAGTCCGCGGAGCCCAGAAGCACGGCTGGGGATGCAAGTGGAGGATCTATGGGATGTACAATCGCCACAGCTTTCTCCCAAAGAGAAGTTCAACGCTTGCTTCGAAAGCATCCCTGTTTCTGCCTTTCCTCAATCTCCTTCAAACCATgTGATTGAGATAAAATCAGACACCAGCCTAGCTGAAGCTGTTAAAATACTGGCAGAACACAATATTTTAAGTGCACCTGTGGTGAATGTTGACGCATCGGAagaagctagttggattgacAGATATATCGGCATAGTTGAGTTTGCGGGTATTGTTGTATGGATCCTGCATCAGTCCGAACCGCCATCTCCTAGGACTCCATCCAGTGGAAAGGCCCTAGCAGCTAAGTCAAATGGATTGACTTCTGGCTTAGAATTTGAGGGCTTAGACCTTGGATCTGCTCCAACAACTTCGGGAAACTTTTTTGAGGATCTGACTTCTTCTGAACTTTACAAGAATACCCAGGTCCATGACATTTCAGGGTCATTTCGCTGGGCACCATTTCTTGCTTTGCAGAGTTCAAACTCATTTCTGACAATGCTCTTGCTGCTCTCAAAGTACAAGATGAAGAGTGTTCCTGTGGTAGATTTGGGTGCATGTAGAATTGATAACATTATTACACAGCCTGCTGTTATTCATATGTTGGCAGAATGTGCTGGGCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCTGTAATGACACCAGATGATATTATCAAGGTTTTTGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAACGAGGGTTGGTGGGGTGCCGGTGATTGCCAAGGGTGGCAGCAAAGCAGTGGGCAACATAAGTCTTCGAGACATTCAATTCTTGCTAACTGCTCCAGAAATCTACCATGATTATAGAGCTATTACAGTAAAAGACTTCATGTCAGCTGTTAGAAACTACTTAAAGGAGCATGAAGAGGCCTTCCCTAAGCTAAGTGACTTGATTACATGCAAAAAGAACTGCACAGTCAAAGAATTGATTCAATTGCTTGACCATGAGAAGATTAATCGAGTCTATGTTGTGGATGATGATGGGAATCTGGAAGGAGTGATCACACTCAGAGATATCATCTCAAGGCTAGTAGATGAACCCCGAGGCTACTTCGGTGATTTCTTTGATGGTGTTCTTCCGCTGCCTGCTAACAGCAGAGTCTA 1247 0.4354 MATMQDSPRSPEARLGMQVEDLWDVQSPQLSPKEKFNACFESIPVSAFPQSPSNHVIEIKSDTSLAEAVKILAEHNILSAPVVNVDASEEASWIDRYIGIVEFAGIVVWILHQSEPPSPRTPSSGKALAAKSNGLTSGLEFEGLDLGSAPTTSGNFFEDLTSSELYKNTQVHDISGSFRWAPFLALQSSNSFLTMLLLLSKYKMKSVPVVDLGACRIDNIITQPAVIHMLAECAGLQWFESWGTKKLSEVGLPVMTPDDIIKVFEDEPVLQAFKLMRKTRVGGVPVIAKGGSKAVGNISLRDIQFLLTAPEIYHDYRAITVKDFMSAVRNYLKEHEEAFPKLSDLITCKKNCTVKELIQLLDHEKINRVYVVDDDGNLEGVITLRDIISRLVDEPRGYFGDFFDGVLPLPANSRV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01496 415 Pfam CBS domain 343 392 IPR000644 -
Bva06g01496 415 Pfam CBS domain 254 303 IPR000644 -
Bva06g01496 415 Pfam CBS domain 54 102 IPR000644 -
Bva06g01496 415 CDD CBS_pair_SF 258 388 - -
Bva06g01496 415 Gene3D - 244 394 IPR046342 -
Bva06g01496 415 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 1 415 - -
Bva06g01496 415 ProSiteProfiles CBS domain profile. 255 316 IPR000644 -
Bva06g01496 415 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 415 - -
Bva06g01496 415 ProSiteProfiles CBS domain profile. 50 118 IPR000644 -
Bva06g01496 415 SUPERFAMILY CBS-domain pair 32 231 IPR046342 -
Bva06g01496 415 ProSiteProfiles CBS domain profile. 338 399 IPR000644 -
Bva06g01496 415 SMART cbs_1 344 392 IPR000644 -
Bva06g01496 415 SMART cbs_1 55 111 IPR000644 -
Bva06g01496 415 SMART cbs_1 259 308 IPR000644 -
Bva06g01496 415 Gene3D - 39 237 IPR046342 -
Bva06g01496 415 SUPERFAMILY CBS-domain pair 219 401 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01496 Bva-Chr6 10833330 10836795 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01496 - - gmx:100776754 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00256 05 1247624 1249734 Bva06g01496 06 10833330 10836795 BWGD
Bva06g01496 06 10833330 10836795 Bva06g01496 06 10833330 10836795 ECH