Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00256 ATGATATTTGTGGACTCTCTGATTGACGAGAACTCATCTGTGATTTTGGTTTTCCACCCTGCTGTTATTCATATGTTGGCAGAATGTTCTGGGCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTAGCTCAAGTTGGTCTTCCAGTGATGACACCAGATCATATTATCAAGGTTTGTGAAGATGAACCAGTGCTTCAACCTTTTAAACTGATGAGAAAAAAGAGGGTTGGAGTGGTGACTGTAATCGCAAAGGGTGGCAGCAGAGCAGTGGGCAATATAAGTCTACGAGATATTCAATTCTTGCTAACTGCTCCAGAAATCTACCATGATTATAGAGCTATTACTGTAAAAGACTTCATGTCAGCCGTTAAAAACTACTTAGAGGAGAATAAAGAAGACTTCCCAAAGCTAAATGACCTCATTACATGTAAAAAGAATTGCACGGACCATGAGAGTATTAATCGGGTCTATGTTGTGGATGATGATGGGAATCTGGAAGGACTGATCACACTCAGAGATATCATCTCAAGGCTAGTAGATTTCTTTGATGGTGTTCTCCCGCAGCCCGCAAACGGCAGAGTTTA 587 0.414 MIFVDSLIDENSSVILVFHPAVIHMLAECSGLQWFESWGTKKLAQVGLPVMTPDHIIKVCEDEPVLQPFKLMRKKRVGVVTVIAKGGSRAVGNISLRDIQFLLTAPEIYHDYRAITVKDFMSAVKNYLEENKEDFPKLNDLITCKKNCTDHESINRVYVVDDDGNLEGLITLRDIISRLVDFFDGVLPQPANGRV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00256 195 Gene3D - 40 181 IPR046342 -
Bva05g00256 195 SUPERFAMILY CBS-domain pair 52 185 IPR046342 -
Bva05g00256 195 CDD CBS_pair_SF 54 176 - -
Bva05g00256 195 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 21 195 - -
Bva05g00256 195 ProSiteProfiles CBS domain profile. 121 189 IPR000644 -
Bva05g00256 195 SMART cbs_1 55 104 IPR000644 -
Bva05g00256 195 SMART cbs_1 140 180 IPR000644 -
Bva05g00256 195 Pfam CBS domain 151 180 IPR000644 -
Bva05g00256 195 Pfam CBS domain 50 99 IPR000644 -
Bva05g00256 195 ProSiteProfiles CBS domain profile. 51 112 IPR000644 -
Bva05g00256 195 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 21 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00256 Bva-Chr5 1247624 1249734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00256 - - gmx:100780629 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00256 05 1247624 1249734 Bva06g01496 06 10833330 10836795 BWGD
Bva05g00256 05 1247624 1249734 Bva05g00256 05 1247624 1249734 ECH