Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01489 ATGAGAAGGGACGCAGAATTCGAACGTGTTCTCAAATTTTTCGATGAAGACGGGGACGGGAAGATTTCACCGTCCGAGCTCAGGAACCGACTAGGTAAGATGGGTGGGgagattttgatgaaagaaGCAGAAATGGCAATAGAGGCAATGGATTCCGATGGAGACGGGTTGCTGAGTTTGGAGGATTTGGTGGCCTTGATGGAAGCTGgaggagaggaagagaagTTGAAGGACTTGAGAGAAGCTTTCGAGTTGTATGACACAGAAGGGTGTGGGTTTATAACACCCAAGAGCTTGAAGAGGATGCTGAGTAAGTTGGGGGAATCAAAATCCATGAACGAATGCAAAAAGATGATCAAACACTTTGATTTGAACGGGGATGGTGTGCTTAGCTTTGAAGAATTCAGAATTATGATGCAGTA 422 0.4194 MRRDAEFERVLKFFDEDGDGKISPSELRNRLGKMGGEILMKEAEMAIEAMDSDGDGLLSLEDLVALMEAGGEEEKLKDLREAFELYDTEGCGFITPKSLKRMLSKLGESKSMNECKKMIKHFDLNGDGVLSFEEFRIMMQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01489 140 CDD EFh 6 67 IPR002048 GO:0005509
Bva06g01489 140 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Bva06g01489 140 ProSitePatterns EF-hand calcium-binding domain. 123 135 IPR018247 -
Bva06g01489 140 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 2 140 - -
Bva06g01489 140 ProSiteProfiles EF-hand calcium-binding domain profile. 74 109 IPR002048 GO:0005509
Bva06g01489 140 ProSitePatterns EF-hand calcium-binding domain. 15 27 IPR018247 -
Bva06g01489 140 Gene3D - 70 140 - -
Bva06g01489 140 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Bva06g01489 140 ProSiteProfiles EF-hand calcium-binding domain profile. 110 140 IPR002048 GO:0005509
Bva06g01489 140 Pfam EF-hand domain pair 77 140 IPR002048 GO:0005509
Bva06g01489 140 Pfam EF-hand domain pair 8 67 IPR002048 GO:0005509
Bva06g01489 140 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Bva06g01489 140 SUPERFAMILY EF-hand 4 139 IPR011992 -
Bva06g01489 140 CDD EFh 78 140 IPR002048 GO:0005509
Bva06g01489 140 Gene3D - 1 69 - -
Bva06g01489 140 SMART efh_1 114 140 IPR002048 GO:0005509
Bva06g01489 140 SMART efh_1 6 34 IPR002048 GO:0005509
Bva06g01489 140 SMART efh_1 42 70 IPR002048 GO:0005509
Bva06g01489 140 SMART efh_1 78 106 IPR002048 GO:0005509
Bva06g01489 140 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 2 140 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01489 3 140 EF-hand Containing Proteins AT1G76650 46.377 4.62e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01489 K13448 - gmx:100816563 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01489 06 10792199 10792939 Bva05g00261 05 1280217 1280915 ECH
Bva06g01489 06 10792199 10792939 Bva06g01489 06 10792199 10792939 ECH