Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00261 ATGAGAAGGGAGGCAGAATTCGAACGCGTTCTAACGTTTTTTGATGAAGATGGGGACGGGAAGATTTCACCATCCGAGCTGAGGAACCGACTAGGTAAGATGGGTGGGGAGATGTTGATGAAAGAAGCAGAAATGGCAATAGAGGCATTGGATTCTGATGGAGATGGGTTGCTGAGTTTGGAGGATTTCGTGGCGTTGATGGAAGCGGgaggagaggaagagaagTTGAAGGACTTGAGAGAAGCTTTCGAGTTGTATGACATAGAAGGGTGTGGGTTTATAACACCCAAGAGCTTGAAGAGGATGCTGAGTAAGTTGGGGGAATCAAAGTCCATTGACGAATGCAAAATCATgatcaaatattttgatttgaatggGGATGGTGTGCTTAACTTTGAGGAATTCAGAACTATGATGCAGTG 422 0.4123 MGGEMLMKEAEMAIEALDSDGDGLLSLEDFVALMEAGGEEEKLKDLREAFELYDIEGCGFITPKSLKRMLSKLGESKSIDECKIMIKYFDLNGDGVLNFEEFRTMMQ 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00261 107 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 107 - -
Bva05g00261 107 ProSitePatterns EF-hand calcium-binding domain. 18 30 IPR018247 -
Bva05g00261 107 ProSiteProfiles EF-hand calcium-binding domain profile. 77 107 IPR002048 GO:0005509
Bva05g00261 107 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Bva05g00261 107 Gene3D - 1 36 - -
Bva05g00261 107 Gene3D - 37 107 - -
Bva05g00261 107 Pfam EF-hand domain pair 9 35 IPR002048 GO:0005509
Bva05g00261 107 ProSitePatterns EF-hand calcium-binding domain. 90 102 IPR018247 -
Bva05g00261 107 ProSiteProfiles EF-hand calcium-binding domain profile. 41 76 IPR002048 GO:0005509
Bva05g00261 107 SUPERFAMILY EF-hand 5 107 IPR011992 -
Bva05g00261 107 Pfam EF-hand domain pair 44 107 IPR002048 GO:0005509
Bva05g00261 107 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 107 - -
Bva05g00261 107 CDD EFh 45 107 IPR002048 GO:0005509
Bva05g00261 107 SMART efh_1 81 107 IPR002048 GO:0005509
Bva05g00261 107 SMART efh_1 45 73 IPR002048 GO:0005509
Bva05g00261 107 SMART efh_1 9 37 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00261 1 107 EF-hand Containing Proteins AT5G42380 49.541 1.66e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00261 K13448 - gmx:100779557 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01489 06 10792199 10792939 Bva05g00261 05 1280217 1280915 ECH
Bva05g00261 05 1280217 1280915 Bva05g00261 05 1280217 1280915 ECH