Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01475 ATGGCACCAAGTGTACTTATAGAGTTTGCTGGACAAAAGGAATCGAGGAAGTGCTCTCTCTCACAAAATATGGGAAAATCACGGAAATACTCCAAAGGTTATACTAGTGGTTTTGTTCCAGACTTCCGGCATGCTGTAGAGACTATGGGTGAATCAGAAGTTTTTGATAGCTCGGGAAGGGTTAATACAGAGCTGGCAGCGTTGGAAGATTCTTATGCTCCCAAGAGGAAGTGCCTCAATTTGAATGTTGATATTGGTGATAGTTTTGGTGCTCCTTTGCAAGTCTTGTCATTATCAAAGATGTCACGTTCTGAGAGAAAGGATTTGGCACTGAGGTTAAAATTGGAACTTGAGCAAGTCAGAAAACTTCAGAAGAAAGTTGCCAATATGAATTCAAATTTCCTTCCTTTATCTCCATCTAGTGATATACGGAGCTGCAGTGATGGACAGAAGAGACCTCCGTTTGAGAGTCAGCAGAGATCACTTGAAGCGTCAGCTCCACATGGTAAGAAGCGACCCCCTCCAGGACGAAATGGTCCTCGGACAAAAGGAAGTAAAACTGGGCGTTCTGAATCAGTTAATCCTGTTGCACCTGTGACTTCTTCAAATGCTGTGTTGATGAAACAGTGCGAGTCATTGCTTAATCGATTGATGTCCCATCAGTTTGGTTGGGTTTTCAACACACCTGTTGATGTTGTTAAGTGGAACATTCCGGATTATTTTACCGTGATTAAGCATCCAATGGATTTGGGAACCGTCAAGAGTAGAATAACTTCGGGTGAATACTCAAGTCCGATGGATTTTGCTGCAGATGTGCGGCTGACTTTCTCAAATGCTATTACGTATAATCCACCTGGCAATGACATACATATTATGGCAGAGACACttggtaaatattttgaagtgaGATGGAAGGCTATGGAGAAGAAAATTCTTGCTGCTGATAATGAGTCATCTGAGCCTTCAAGAACTATTACTCGTATAGAAACTGAAACATCTGTCCGAATTCCTCCctccaaaaagaagaaaccaacACCAAATGACATTAGTGTCAAGCCAGAGCCTGTTAGAAGAATCATGACTGATGCAGAGAAGCATAAATTGAGCATGGAGTTAGAGGCCTTGCTTGCCGAGTTGCCTGAAAgtattgttgattttttgaAAGAGCAAAGTCAAAATGCTACTCAAACCACTGATGATGAAATTGAGATTGATATAGATGCTCTTAGTGATGATACCTTATTCAAACTACGGGAGCTTCTTGATGACTATATGCTGGAGAAGCAGAAAAGCCAGGCAAAAGCTGGACCTTGTGAAATGGAGTTGCCAAATGAATCAGGATTTAGTTATTCATACATGCAGCCATGTaaagGTAATGACCCAGTCGAGGAAGATGTCGACATTGTTGGTGGGAATGATCTTCCTGTTTCCAGTTATCCTCCTGTAGAGATTGAGAAAGATGGAGCTAACAAGAAATACAGTAGTTCAAGCAGCTCCAGTAGCGAATCTGGCTCTTCATCCAGTGATTCAGACTCGGGTAGTTCATCTGGAAGTGAGTCAGATACCGCTAAAGCTTCAGAACCTGTTGGTGTTATCAAGGAAAATTTAGGTTCTGGTTTGCCATTGGATCAAAAGAAATGGGATACTAGTAATGCAAATACTGGAAAGGATTTGATGGATGGGGTTGGCCAAATTGAACAGAGTTCCCAGTCTAAGCCAATTGCTACTGAGCGGGAAGGTCATCAAGAGGGGGAGAGTGCTCCCTCTGAGAGGCAAGTCTCCCCCGACAAGCTATATCGTGCAGCTTTGCTAAGGAGCCGCTTTGCTGACACTATTCTTAAAGCTCGAGAAAAGGCACTTGAAAAGGGGGAAAAGCGGGATCCTGAAAAACTTagaatagagagagaagaacTTGAAAGACGGCAAAAAgaagAGAAAGCTCGATTGCAGGCCGAGGCAAAGGCTGCAGAAGAGGCTCGGAGGAAAGCCGAAGCTGAAGCTGCAGCTGAAGCCAAAAGGAAGAGGGAACTGGAGAGAGAAGCAGCTCGCCAGGCATTGCAACAGATGGAGAAGACTGTTGATATCAATGAAAGTAGTCGATTTTTGGAAGATCTGGAGATGCTAAGAACTGTACATGATGGACATTTACCAAGTTTCATTGATGAGACAAGCGCTGATCATCCTCAAAATGGGTTGGGTAGTTTTAAACTCCAGGGGAATCCTTTGGAACAACTAGGATTGTACATGAAAGCAGATGATGAGgatgaggaggaagaagaaccTTCTCAGAGTGCTCCAGGACCAGCAAACGATAtagaagaaggagaaattgaTTG 2336 0.4122 MAPSVLIEFAGQKESRKCSLSQNMGKSRKYSKGYTSGFVPDFRHAVETMGESEVFDSSGRVNTELAALEDSYAPKRKCLNLNVDIGDSFGAPLQVLSLSKMSRSERKDLALRLKLELEQVRKLQKKVANMNSNFLPLSPSSDIRSCSDGQKRPPFESQQRSLEASAPHGKKRPPPGRNGPRTKGSKTGRSESVNPVAPVTSSNAVLMKQCESLLNRLMSHQFGWVFNTPVDVVKWNIPDYFTVIKHPMDLGTVKSRITSGEYSSPMDFAADVRLTFSNAITYNPPGNDIHIMAETLGKYFEVRWKAMEKKILAADNESSEPSRTITRIETETSVRIPPSKKKKPTPNDISVKPEPVRRIMTDAEKHKLSMELEALLAELPESIVDFLKEQSQNATQTTDDEIEIDIDALSDDTLFKLRELLDDYMLEKQKSQAKAGPCEMELPNESGFSYSYMQPCKGNDPVEEDVDIVGGNDLPVSSYPPVEIEKDGANKKYSSSSSSSSESGSSSSDSDSGSSSGSESDTAKASEPVGVIKENLGSGLPLDQKKWDTSNANTGKDLMDGVGQIEQSSQSKPIATEREGHQEGESAPSERQVSPDKLYRAALLRSRFADTILKAREKALEKGEKRDPEKLRIEREELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQQMEKTVDINESSRFLEDLEMLRTVHDGHLPSFIDETSADHPQNGLGSFKLQGNPLEQLGLYMKADDEDEEEEEPSQSAPGPANDIEEGEID 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01475 778 MobiDBLite consensus disorder prediction 455 597 - -
Bva06g01475 778 Pfam Bromodomain 210 294 IPR001487 GO:0005515
Bva06g01475 778 Pfam Bromodomain extra-terminal - transcription regulation 360 422 IPR027353 -
Bva06g01475 778 SMART bromo_6 199 309 IPR001487 GO:0005515
Bva06g01475 778 CDD Bromo_plant1 206 304 IPR037377 -
Bva06g01475 778 MobiDBLite consensus disorder prediction 619 691 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 134 164 - -
Bva06g01475 778 Gene3D - 354 432 IPR038336 -
Bva06g01475 778 Coils Coil 106 133 - -
Bva06g01475 778 PANTHER TRANSCRIPTION FACTOR GTE8 25 763 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 717 778 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 183 197 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 491 523 - -
Bva06g01475 778 ProSiteProfiles Bromodomain profile. 218 290 IPR001487 GO:0005515
Bva06g01475 778 Coils Coil 633 692 - -
Bva06g01475 778 PANTHER TRANSCRIPTION FACTOR GTE10 25 763 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 134 197 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 544 575 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 619 685 - -
Bva06g01475 778 MobiDBLite consensus disorder prediction 723 737 - -
Bva06g01475 778 PRINTS Bromodomain signature 237 253 IPR001487 GO:0005515
Bva06g01475 778 PRINTS Bromodomain signature 253 271 IPR001487 GO:0005515
Bva06g01475 778 PRINTS Bromodomain signature 271 290 IPR001487 GO:0005515
Bva06g01475 778 PRINTS Bromodomain signature 221 234 IPR001487 GO:0005515
Bva06g01475 778 ProSiteProfiles NET domain profile. 350 432 IPR027353 -
Bva06g01475 778 SUPERFAMILY Bromodomain 206 310 IPR036427 GO:0005515
Bva06g01475 778 Gene3D - 192 323 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01475 Bva-Chr6 10723917 10728737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01475 - - gmx:100776368 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01475 06 10723917 10728737 Bva05g00273 05 1337867 1342922 ECH
Bva06g01475 06 10723917 10728737 Bva06g01475 06 10723917 10728737 ECH