Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00273 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCGAGGAAGTGCTCTCTCTCACAAATAATGGGGAAATCACGGAAATACTCCAAAGGTTATGCTAGCGGCTTTGTTCCTGACTTCCGGCATGCTGTAGAGACTATGGGTGAATCAGAAGGGTTTGGTAGCTCGGGAAGGGTTGATACAGAGCTGACAGTGTCTGAAGGTTCTTATGCTCCTAAGAGGAAGTGCCTCAGTTTGAATGTTGATGGGGGTGATAGTTTTGGTGCTCCTTTGCAGGTCTTGTCGTTATCAAAGATGTCACGTTCTGAGAGGAAGGATTTGGGACTGAGGTTGAAGTTGGAACTTGAGCAAGTTAGAAAACTTCAGAAGAAAGTTTCCAATATGTATTCTAATTTCCTAGCTATATCTCCCTCCAGTGATATACGGAGCTGCAGTGATGGACAGAAGAGGCCCCCACTTGAGAGTCAGCAGAGGTCACTTGAAGCATCAGTACATCATGGTAAAAAACGACCCCCTCCTGGAAGAAATGGTCCTCGGACTAAAAGTACTACTGGACGTTCTGAATCAGTTAATCCTGTTGCACCAGTGAACTCATCTAATGCTATGTTGATGAAACAGTGTGAGACATTGCTTAATCGTTTGATGTCCCATCAATTCGGTTGGGTATTTAACACACCCGTTGATGTGGTGAAGCTAAACATTCCGGATTATTTTACTGTCATTAAGCATCCAATGGATTTGGGTACTATCAAGAGTGGAATAACATCAGGTGAATACCCGAGTCCGATGGATTTTGCTGCAGATGTGCGGCTGACTTTCTCAAATGCAATGACATATAATCCACCTGGTAATGATGTACATATTATGGCAGAGACActtagtaaatattttgaagtgaGATGGAAGGctatagagaagaaaattctTGCTGCTGACATTGTGCCATCTGAGCCTTCAAGACCTACTACTCGTGTAGAAACTGAAACTTCTGGCCAAATTCCTCCctctaaaaagaagaaagtagcACTAAATGACAATAGTGCCAAACCAGAGCCTGTTAAAAGAATCATGACTGATGCGGAGAAGCACAAATTGAGTATCGAGTTGGAGGACTTGCTTGCCGAGTTGCCTGAGAGCATTGTTGATTTCTTGAAAGAGCAAAGTCACAATGCTGGCCAAACCAATGATGATGAAATTGAGATTGATATAGATGCACTTAGTGATGATACCTTATTCAAACTCCGGAAACTTCTTGATGACTACATGCTGGAGAAGCAGAAAAGCCAGGCAAAAGCTGGACCTTGTGAAATGGAGCTACCAAATGAATCAGGATTTAGCAATTCATCAATGCAACCTTGTAAAGATAATGACCCAGTTGAGGAAGATGTGGACATCGTTGGGGGGAATGATCCTCCCGTTTCCAGTTATCCTCCAGTAGAGATTGAGAAAGATGGAGCAAACAGGAACAGTAAATGCAGTAGTTCAAGCAGCTCCAGTAGCGATTCTGGCTCTTCATCTAGTGATTCGGACTCAGGTAGTTCATCTGGAAGTGAGTCAGACACCGCTAAAGCTTCAGAACCTGTTAGTGTTATCAAGGAAAATTTAGGTTCTGGTTTGCCAATGGATCAAAAGAAAGGGGATCTTGGTAATGCAGATAATAGAAATGATTTAATGAATGGAATTGGCCAAATTGAACAAAGTAACCAGTCTAAGCCAGTTGCTGCGGAGCCTGAAGGTCATCAAGAGGgGGAGAGTACTCCATCTGATAGACAAGTCTCCCCCGATAAAGCTTATCGTGCAGCTTTGCTAAGGAGCCGCTTTGCTGATACCATACTTAAAGCTAGAGAAAAAGCACTTGAAAAGGGGGGAAAACGGGATCGTGAAAAACTTAGAGCAGAGAGAGAGGAACTTGAAAGGCGGCAAAAAGAAGaGAAAGCTCGATTGCAGGCTGAGGCAAAGGCTGCAGAAGAGGCACGGAGGAAAGCTGAAGCCGAAGCCGCAGCTGAAGCCAAAAGGAAGAGGGAACTGGAGAGAGAAGCAGCTCGACAGGCATTGCAACAGATGGAGAAGACAGTTGATATGAATGAAAATAGTCAATTTTTGGAAGATCTGGAGATGCTGAGAACCGTGCATGATGAACATTTACCAAGTTTCACAGAGGACACAAGCCCTGATCATCCTCAAAATGGATTGGGTAGTTTTAAACTCCAGGGGAATCCTTTGGAACAACTAGGATTATACATGAAAGCAGATGATGACGAGGAGGAGGAAGAACCTCCTCAGAGTGCTCCAGGACCAGCAAACGATGtagaagaaggagaaattgaTTG 2336 0.4259 MAPTVPIEFAGQKESRKCSLSQIMGKSRKYSKGYASGFVPDFRHAVETMGESEGFGSSGRVDTELTVSEGSYAPKRKCLSLNVDGGDSFGAPLQVLSLSKMSRSERKDLGLRLKLELEQVRKLQKKVSNMYSNFLAISPSSDIRSCSDGQKRPPLESQQRSLEASVHHGKKRPPPGRNGPRTKSTTGRSESVNPVAPVNSSNAMLMKQCETLLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTIKSGITSGEYPSPMDFAADVRLTFSNAMTYNPPGNDVHIMAETLSKYFEVRWKAIEKKILAADIVPSEPSRPTTRVETETSGQIPPSKKKKVALNDNSAKPEPVKRIMTDAEKHKLSIELEDLLAELPESIVDFLKEQSHNAGQTNDDEIEIDIDALSDDTLFKLRKLLDDYMLEKQKSQAKAGPCEMELPNESGFSNSSMQPCKDNDPVEEDVDIVGGNDPPVSSYPPVEIEKDGANRNSKCSSSSSSSSDSGSSSSDSDSGSSSGSESDTAKASEPVSVIKENLGSGLPMDQKKGDLGNADNRNDLMNGIGQIEQSNQSKPVAAEPEGHQEGESTPSDRQVSPDKAYRAALLRSRFADTILKAREKALEKGGKRDREKLRAEREELERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQQMEKTVDMNENSQFLEDLEMLRTVHDEHLPSFTEDTSPDHPQNGLGSFKLQGNPLEQLGLYMKADDDEEEEEPPQSAPGPANDVEEGEID 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00273 778 MobiDBLite consensus disorder prediction 322 336 - -
Bva05g00273 778 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
Bva05g00273 778 MobiDBLite consensus disorder prediction 179 197 - -
Bva05g00273 778 Pfam Bromodomain extra-terminal - transcription regulation 359 421 IPR027353 -
Bva05g00273 778 Pfam Bromodomain 209 293 IPR001487 GO:0005515
Bva05g00273 778 Gene3D - 353 431 IPR038336 -
Bva05g00273 778 PANTHER TRANSCRIPTION FACTOR GTE8 25 762 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 430 599 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 620 697 - -
Bva05g00273 778 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Bva05g00273 778 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Bva05g00273 778 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Bva05g00273 778 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Bva05g00273 778 Gene3D - 188 314 IPR036427 GO:0005515
Bva05g00273 778 MobiDBLite consensus disorder prediction 723 738 - -
Bva05g00273 778 PANTHER TRANSCRIPTION FACTOR GTE10 25 762 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 319 349 - -
Bva05g00273 778 CDD Bromo_plant1 205 303 IPR037377 -
Bva05g00273 778 MobiDBLite consensus disorder prediction 558 576 - -
Bva05g00273 778 Coils Coil 622 700 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 620 686 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 142 162 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 490 526 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 142 197 - -
Bva05g00273 778 MobiDBLite consensus disorder prediction 713 778 - -
Bva05g00273 778 ProSiteProfiles NET domain profile. 349 431 IPR027353 -
Bva05g00273 778 SMART bromo_6 198 308 IPR001487 GO:0005515
Bva05g00273 778 SUPERFAMILY Bromodomain 205 309 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00273 Bva-Chr5 1337867 1342922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00273 - - gmx:100782458 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01475 06 10723917 10728737 Bva05g00273 05 1337867 1342922 ECH
Bva05g00273 05 1337867 1342922 Bva05g00273 05 1337867 1342922 ECH