Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01440 ATGGCCGCTAACCCTAACAGAATGCAACAAAGGAAAGAGCGTAGGATGTTTGCAACTTCCGACGACACTGCCATGACAAAGCAAGTTCTGGCAACTCATGCTCCTGATGGTCGTGACATTGTTGTCAATCCCATTATCCAACTCGTTGATGAGATCTTGATTCATGCCATTGCTCCTGATGTTGATCTATCTTGCAAGTGCTCGGGAAGTGTAGATGAACATGCAACAACAATGGTGATACTGAATACTCTGTCAAGATATAAATGGCATGCAAAAATGGTTTTCACCTTAGCAGCCTTTGCTGTAAAATTCGGGGAGTTTTGGCTTGTTGCTCAGCAGAGCTCTGGAAcagcaaatataaataaacttgcCAAGTCAGTGGCCCTCCTTAAGCAACTGCCTGACCTTGTAGAGAGTTCTGCCTTCCTGAAACCCCAGCTTGATGCACTCAATTTGCTTGTCAAGGCCGCACTGGATGTAACCAAGTCCATTGTTGAATTCAAGTCTCTACCATCTCAATACATTTCAGAGGACACACCCCCTATGTCCGTTGCCAGTGCTCATATTCCCATTGCTGCCTATTGGACCATCCGAAGTGTTGTGGCTCTTTCCTCGCAGATTACTAGTCTTATAGGCTTGAGAAACGAaTACGTTTTATCAACCCCAGAGGAATGGGAATTATCAAGTTTGGCTTATAAGGTCAGCAGCGTACATAAGCACCTTAAGACCCAACTGGCTATCTGCTACAAATATATGGATGACAAGAAATACGTAGAGGACTACGAATTTCTGAAGGAATGTTTCCAGATAGCCTATGTCGACAATCAGAAAATTCTCTCAATACTGTTTCGCACTACAACAGACCCGTTGCCACTTGTTGATGCTAGCAGAACAAAGGTTGGTGTGGAGCTTCTAAGGAAGAAACACGTGTTACTACTCATATCAGACCTTGATATTTCACAAGAAGAGATTGTAATACTTGATAACTTGTATCAAGATGCAAAAATGAGAACAGATGTGCAGTATGAAATGGTGTGGATTCCAATTGTGAACAGATCGAATTGGAATGATATTAATCAAGAGAAGTTTGGGTCCTTGCAATCAATGATGCCGTGGTATAGTGTGCACCATCCTCTGGACATTGATCATTCTGTCATTAAGTATATCAGAGAGGACTGGAACTTCTCAAAGAGGACCATTATAGTGGCCCTTGATCCACAAGCCAGGGTGTGCTCCACCAATGCACTCCACATGCTATGGATTTGGGGAAATTGGGCTTTCCCGTTCACTAGTGACAAAGAGGAATCCTTGTGGAAggcagagatttggtcccttGAGTTAATCGTTGATGGGATTGATGCTAATCTTCTAGAATGGATGACAGAAGGCAGACACATATGCCTCTATGGGGGTGAAGATATCAACTGGCTTCGAACATTCACAAGTACTGCAATGTCTGTTGCAAGACTTGCTAATATCACATTAGAGCTGGTCTATGTGGGGAAGAGCAATGCAAAAGAGCGGATGCAGAGAATGATTTCTACCTTTGCTCAAGAAAAGTTGAGTCATTTCTGGCCTAATGTCACATCCATTTGGTTCTTCTGGGCAAGATTGGAGAGCATGTTGTACTCAAAGTTGCAGCTTAACAAAACTGTGGAGAATGATGAGATTATGAGTGAAGTGATGACTGTGCTAACCTTTGATGGCAGCGATAAAGGATGGGCAATATTCTGCAAAGGTGCTGACATGGCCAAAGCCAATGGAACGACAGCATTGAAAGGGCTAAACGAGTTTGAAAACTGGAAGATAAATGCCGAGATAGATGGGTTTGTGCCAGCTTTCAGGGAATACCTGGAACCAATTCACCCACCGCGTCATTGTAATCGCCTTATCCTTCCCGGGAGCACTGGTGGTATCCCAGAAAGGGTTGTGTGTGCCGAGTGTGGCCGTCAAATGGAAAAGTACTTCATGTACCGTTGCTGCGTGGAGTA 1991 0.4304 MAANPNRMQQRKERRMFATSDDTAMTKQVLATHAPDGRDIVVNPIIQLVDEILIHAIAPDVDLSCKCSGSVDEHATTMVILNTLSRYKWHAKMVFTLAAFAVKFGEFWLVAQQSSGTANINKLAKSVALLKQLPDLVESSAFLKPQLDALNLLVKAALDVTKSIVEFKSLPSQYISEDTPPMSVASAHIPIAAYWTIRSVVALSSQITSLIGLRNEYVLSTPEEWELSSLAYKVSSVHKHLKTQLAICYKYMDDKKYVEDYEFLKECFQIAYVDNQKILSILFRTTTDPLPLVDASRTKVGVELLRKKHVLLLISDLDISQEEIVILDNLYQDAKMRTDVQYEMVWIPIVNRSNWNDINQEKFGSLQSMMPWYSVHHPLDIDHSVIKYIREDWNFSKRTIIVALDPQARVCSTNALHMLWIWGNWAFPFTSDKEESLWKAEIWSLELIVDGIDANLLEWMTEGRHICLYGGEDINWLRTFTSTAMSVARLANITLELVYVGKSNAKERMQRMISTFAQEKLSHFWPNVTSIWFFWARLESMLYSKLQLNKTVENDEIMSEVMTVLTFDGSDKGWAIFCKGADMAKANGTTALKGLNEFENWKINAEIDGFVPAFREYLEPIHPPRHCNRLILPGSTGGIPERVVCAECGRQMEKYFMYRCCVE 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01440 663 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 61 662 - -
Bva06g01440 663 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 6 58 - -
Bva06g01440 663 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 61 662 IPR039299 GO:0010088
Bva06g01440 663 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 6 58 IPR039299 GO:0010088
Bva06g01440 663 Pfam Sieve element occlusion C-terminus 433 661 IPR027944 -
Bva06g01440 663 Pfam Sieve element occlusion N-terminus 20 61 IPR027942 -
Bva06g01440 663 Pfam Sieve element occlusion N-terminus 62 269 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01440 Bva-Chr6 10532696 10538201 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01440 - - gmx:100789215 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01440 06 10532696 10538201 Bva05g00305 05 1492682 1498481 ECH
Bva06g01440 06 10532696 10538201 Bva06g01440 06 10532696 10538201 ECH