Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00305 ATGGCTGGTACCCCAGTCCCCGCACATGCCTCTGCCTCTGTCTCTGTCCCTAACCCCAATATTAGAATGCAGCAAAAAAAAGAGCGTAGCATATTCCCAACTCCCGACGACACTGCCATGATGAAACAAGTTCGGGCAACTCATGCTCCTGACGGTCGTGAAATTGTTGTCAATCCTATTATCCAACTCATTGAGGGGATCCTCATTCATGCCATTGCAAAACCAGAAGAACAAGCAGAAACACTGCCTTTGGCTCAATCTGATGTGCTTCACACATTAGCTTTTACCATACACAGAATCTCCTGCGAGCTATCATGCAAGTGCTCGGAAGGTGAAGATGTACATGCAACAACAGTGGGGTTATTGAATACTCTGTCAACTTACCCATGGCATGCAAAAGTGGTTTTAACCTTAGCAGCCTTTGCTGTTAATTTTGGAAAGTTTTGGCTTGTTGCTCAGCAAAGCTCTACAAATACGCTGGCCAATTATGTGGCCATCCTTGAGCAACTGCCTGAACTTGTAGAGAGTTCCATTTCTCTTAAACCCCAGTTTGATGCACTCAATCTACTCGTGAAGAACGCACTAGATATAACAAAATCTATTGTTGAATTCATGGCTTTACCATCTCATTACATTTCAGAGGACACACCTCCTATGTCTGTTGCCAGTGCTCATATTCCTATTGCTGCCTATTGGACCATGCGAAGCATTGTGGCTCTTTCCTCACAGATTATCAGTCTTATAGGCTTGAGAAATGAGTACATTTCATCAACCAGAGACTCATGGGAATTATCAAGTTTGGCACATAAGGTTAACAGCATGCATGAGCACCTCAAGAACGAACTGGCAACTTGCTACAAATATATAGacgaaaagaaatatatacagGACTACGAAAATCTGAAGACTTATTTACAGATAGACTATGATGACAACCAGGAAATTCTCTCAATATTGTTTGGCACTGCAACAGACCCATATCCACTTGTTGAAGCCAACAAAGCAAAGgTTGGTGTGGAGGCACTAAGGGACAAACATGTGTTGCTGCTCATATCAGATCTTGATATTTCACAAGAAGAGATTATAATACTTGATAACTTGTATACGGATGCAAAATTGAGACCAAAGTTGAACTATGAAATGGTGTGGATCCCAATTGTGGACAGATTGACCTGGAATGATATGAATCAACAGAAGTTTGGGCATTTGCAATCAGTGATGCAGTGGTACAGTGTGGACAATCCTCTAAGTATTGATCGTTCTGtcattaaatatatcaaagaGGACTGGAATTTCTCAAAGAGGCCCATTGTAGTGGCACTGGATCCACAAGCCAAGGTGTGCTCCACCAATGCACTCCACATGATATGGATTTGGGGGAATTCGGCTTTTCCATTCACTcgggagaaagaagaaaccttGTGGAAggcagagatttggtcccttAAATTAGTTATCGATGGCATTGATCCTACAGTTCTGGATTGGGTAAGagcaaaatttatattcatttatttatcctTTTCATGTCAGTTCTATTGCATATTGTTTTTAAGAATGACATTTAACAAATggaatttccttttccctCTGTACCCAGATGACAAATGGCAAACACATATGCCTCTACGGGGTGAAAATATTGAATGGCTTCGAACATTCGCAAATACTGCGGCCTCTGTTGCAAGCGCGGCTAATATCACTCTAGAGATGGTCTATGTGGGGAAGAGCAATGCAAAAGAGCGAATGCAAAGAATGATTTCTACTTTTGCTAAGGAAAAGTTCAGTTACTATTGGTCAAATGCCACACGCATTTGGTTTTTCTGGGCAAGATTAGAGAGCATGTTGTACTCCAAGTTGCAGCAAAACAAAAGcttagaaaatgatgaaatcatGAGTGAAGTGATGACTGTCCTAACCTTTGATGGCAGCGATCGGGGATGGGCAATATTTTGGAAAGGTATTGATATGGCCAAAGCCAATGGAACCGCGGCTCTGAAAGTGCTGAACGAGTTTGATAATTGGAAGGAAAACACCGAGAGAGATGGATTTGTGCCAGCTTTCAGGGAATACTTTGAGCAACTTCACACCTCACATCAATGTAAGCAGGAAAAAGGAGATaagaaatgtataaaatacTACGAAAATCTGAAGAAGTATTTCCAGATAATCCATGTTGACAACCAGAAAATTCTCTCAATACTGTTTAGTGTTGCAGCAAACCCAAATCCACTTGTTGATGCCAACAAAGCAAAGGTTGCTGTGGAGGCACTAAGGAAGAAACATGTATTGCTGCTCATTTCAGATCTTGATATTTCACAAGAAGAGATTATAGTTCTCGAAAACTTATATAAGGATGCAAAATCGAAATCAGTGGTGCATTATGACATGGTGTGGATCCCAGTTGTAGGTAGACTGGCCTGGAACGATACGAATCAGGAGAAGTTTGGGCATTTGCAAGCAATGATGCCGTGGTACAGTGTGGACAATCCACTGAGCATTGCTCGTTCTGTCATTAAGTATATCAGAGAGGATTGGAATTTCTCAAAAAGGCCCATTATAGTTGCGTTGGATCCACAAGCTAGGGTGAATTCCATCAATGCACTCCACATGATATGGATTTGGGGGAATTTGGCTTTTCCATTCACTCCTGAGAAAGAAGAATTCTTATGGAAggcagagatttggtcccttgaattaattgttgaCGGAATTGATCCTACTATTCTGGAATGGATGACAGAAGGCAAACACATATGCCTCTACGGGGGTGAAGATATTGAATGGATTCGAACATTCACAAATACTGCAGCATCTGTTGCAAGGGATGCTAATATCACTTTAGAGATGGTCTATGTGGGGAAGAGCAATCCAAAAGCGCGGACGCAAAGAATCATTTCTACTTTAGCTACGGAAAagttaagttattttttgcCTAATGCCACATCCATTTGGTTCTTCTGGACAAGATTAGAAAGCATGTTGTACTCAAAGTTGCAGCATAACAAGACCGTGGAAAATGATGAGATTATGAGTGAAGTGATCACTGTCCTGAGCTTTGATGGCAGCGATCGGGGATGGGCAATATTTTGGAAAGGTATTGATATGGCCAAAGCCAACGGAACCGCGGCTCTGAAAGTGCTGAACGAGTTCGATAATTGGAAGGCAGACGCCGAGAGAGATGGATTTGTGCCAGCTCTCAGGGATTACTTGGAGCAAATTTACAACCCACATCattgtaagaaagaaaaagacaaaaaatatatacaggATTACGAAACTCTGAAGACTTATTCCCAGAAAGGCTATGTTGACAACCAGAAAATTCTTTCAACAATGTTTAGCACTTCAACAGATCCTCATCCACTGGTTGATCCCAACAAAGCAAGGATTTGTTCTAAAACTTCATactttaacaaaagaaaaaaattatctttacatACTCcatattctaaaaaatttcaatttcttagcAACCAGGTTGGTGTGGAGGCACTAAGGAACAAACATGTGTTGGTGCTCATATCAGATCTTGATATTTCACAAGAAGAGATTATAATACTTGATAACTTGTATAAGGATGCAAAATTGAGATCAGAGGTGAGCTATGAAATGGTGTGGATCCCAATTGTGGATAGATTGGCCTGGAATGATACGAATCAAGAGAAGTTTGGGCATTTGCGAGCAATGATGCCGTGGTACTGTGTGGACAGTCCACTGAGAATTGCTCGTTCTGTCATTAAGTATATCAGAGAGAATTGGAATTTCTCAAAAAGGCCCATTGTAGTAACACTGGATCCACAAGCCAAGGTCTGCTCCACCAATGCTCTCCACATGATATGGATTTGGGGGAATTTGGCTTTCCCATTCACTCCTGAGAAAGAAGAATTCTTATGGAAagcagagatttggtcccttgaattaattgttgaCGGAATTGATCCTACTATTCTGGAATGGATGACAGAAGGCAAACACATATGCCTCTACGGGGGTGAAGATATTGAATGGATTCGAACATTCACAAATACAGTGGCGTCTGTTACAAGGGCTGCTAATATGAAGTTAGAGTTGGTCTATGTGGGAAAGAACAATGCAAAAGAGCGAATGCAGAGAATGATTTCTATCTTCGATAAGGAAAAGTTCAGTTATCATTGGCCTAATGCCACATCCATTTGGTTCTTCTGGACAAGATTAGAAAGCATGTTGTACTCAAAGCTGCAGCATAACAAGACCGTGGAAAATGATGAGATTATGAGTGAAGTGATCACTGTCCTAAGCTTTGATGGCAGCGATCGGGGATGGGCAATATTTTGGAAAGGTATTGATATGGCCAAAGCCAACGGAACCGCGGCTCTGAAAGTGCTGAACGAGTTTGATAATTGGAAGGCAAACGCCGAGAGAGATGGGTTTGTGCCAGCTTTCAGGGAATACTTGGAGCCCCCACATCACTGTAATCGCCTTATCCTTCCTGGGAACATTGGTGGTATCCCAGAGAGGGTTGTGTGCCCTGAGTGTGAACATCAAAAGGAGCAAATTCACAACCCACATCACGAAAATGATATTCAAAATCCAAttgttagaaaaaataatggtgGTAACATCTCTGAGATAAGAGGCAAGGTTAATAACCGCAATTCACAACATCATGGTCAACTTAATGGGTCCACTTTAGTCGATTGTGATATCATCAATATTATACATCCTAGGGATGACAATTTCTACCGTGTCGGCATGGATACAGCGGGGACTTCTCGTCGGAGAAGAAGGCGTAGGTCACACTA 4784 0.3917 MAGTPVPAHASASVSVPNPNIRMQQKKERSIFPTPDDTAMMKQVRATHAPDGREIVVNPIIQLIEGILIHAIAKPEEQAETLPLAQSDVLHTLAFTIHRISCELSCKCSEGEDVHATTVGLLNTLSTYPWHAKVVLTLAAFAVNFGKFWLVAQQSSTNTLANYVAILEQLPELVESSISLKPQFDALNLLVKNALDITKSIVEFMALPSHYISEDTPPMSVASAHIPIAAYWTMRSIVALSSQIISLIGLRNEYISSTRDSWELSSLAHKVNSMHEHLKNELATCYKYIDEKKYIQDYENLKTYLQIDYDDNQEILSILFGTATDPYPLVEANKAKVGVEALRDKHVLLLISDLDISQEEIIILDNLYTDAKLRPKLNYEMVWIPIVDRLTWNDMNQQKFGHLQSVMQWYSVDNPLSIDRSVIKYIKEDWNFSKRPIVVALDPQAKVCSTNALHMIWIWGNSAFPFTREKEETLWKAEIWSLKLVIDGIDPTVLDWVRAKFIFIYLSFSCQFYCILFLRMTFNKWNFLFPLYPDDKWQTHMPLRGENIEWLRTFANTAASVASAANITLEMVYVGKSNAKERMQRMISTFAKEKFSYYWSNATRIWFFWARLESMLYSKLQQNKSLENDEIMSEVMTVLTFDGSDRGWAIFWKGIDMAKANGTAALKVLNEFDNWKENTERDGFVPAFREYFEQLHTSHQCKQEKGDKKCIKYYENLKKYFQIIHVDNQKILSILFSVAANPNPLVDANKAKVAVEALRKKHVLLLISDLDISQEEIIVLENLYKDAKSKSVVHYDMVWIPVVGRLAWNDTNQEKFGHLQAMMPWYSVDNPLSIARSVIKYIREDWNFSKRPIIVALDPQARVNSINALHMIWIWGNLAFPFTPEKEEFLWKAEIWSLELIVDGIDPTILEWMTEGKHICLYGGEDIEWIRTFTNTAASVARDANITLEMVYVGKSNPKARTQRIISTLATEKLSYFLPNATSIWFFWTRLESMLYSKLQHNKTVENDEIMSEVITVLSFDGSDRGWAIFWKGIDMAKANGTAALKVLNEFDNWKADAERDGFVPALRDYLEQIYNPHHCKKEKDKKYIQDYETLKTYSQKGYVDNQKILSTMFSTSTDPHPLVDPNKARICSKTSYFNKRKKLSLHTPYSKKFQFLSNQVGVEALRNKHVLVLISDLDISQEEIIILDNLYKDAKLRSEVSYEMVWIPIVDRLAWNDTNQEKFGHLRAMMPWYCVDSPLRIARSVIKYIRENWNFSKRPIVVTLDPQAKVCSTNALHMIWIWGNLAFPFTPEKEEFLWKAEIWSLELIVDGIDPTILEWMTEGKHICLYGGEDIEWIRTFTNTVASVTRAANMKLELVYVGKNNAKERMQRMISIFDKEKFSYHWPNATSIWFFWTRLESMLYSKLQHNKTVENDEIMSEVITVLSFDGSDRGWAIFWKGIDMAKANGTAALKVLNEFDNWKANAERDGFVPAFREYLEPPHHCNRLILPGNIGGIPERVVCPECEHQKEQIHNPHHENDIQNPIVRKNNGGNISEIRGKVNNRNSQHHGQLNGSTLVDCDIINIIHPRDDNFYRVGMDTAGTSRRRRRRRSH 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 701 1082 - -
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 545 702 - -
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 19 504 - -
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1159 1512 IPR039299 GO:0010088
Bva05g00305 1594 Pfam Sieve element occlusion C-terminus 1294 1512 IPR027944 -
Bva05g00305 1594 Pfam Sieve element occlusion C-terminus 886 1082 IPR027944 -
Bva05g00305 1594 Pfam Sieve element occlusion C-terminus 470 505 IPR027944 -
Bva05g00305 1594 Pfam Sieve element occlusion C-terminus 545 703 IPR027944 -
Bva05g00305 1594 Pfam Sieve element occlusion N-terminus 36 304 IPR027942 -
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 701 1082 IPR039299 GO:0010088
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 545 702 IPR039299 GO:0010088
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 19 504 IPR039299 GO:0010088
Bva05g00305 1594 MobiDBLite consensus disorder prediction 1 27 - -
Bva05g00305 1594 Coils Coil 770 790 - -
Bva05g00305 1594 MobiDBLite consensus disorder prediction 11 27 - -
Bva05g00305 1594 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1159 1512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00305 Bva-Chr5 1492682 1498481 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00305 - - gmx:100811452 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01440 06 10532696 10538201 Bva05g00305 05 1492682 1498481 ECH
Bva05g00305 05 1492682 1498481 Bva05g00305 05 1492682 1498481 ECH