Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01406 ATGGGGGAGAGTGCAATGGGTGGTGCTTCTCTACCGTCAGGTCCAGACGCCAAGAAGCGGAGGGTTACCTACTTCTACGAACCCACGATCGGCGATTACTACTATGGCCAAGGACACCCAATGAAACCCCACCGCATCCGCATGGCTCACAATCTCATCATTCATTATTCACTTCATCGACGGATGGAAATCAACCGTCCCTTCCCAGCCGGACCCGACGATATACGCCGTTTCCACTCTGACGACTACGTCGAATTCCTCCGTCGCGTCACGCCGGAGACCCTCGGCGAGATCACATTCTCTCGTCAGCTCAAGCGCTTCAATGTTGGGGAGGACTGTCCCGTCTTTGACGgcttattcaatttttgtcGGGCCTCGGCTGGTGGTTCCATTGGTGCTGCCGTCAAGTTGAACCGTGGCGACGCTGATATTGCTATCAATTGGGCCGGTGGCTTGCACCATGCTAAGAAATCCGAGGCTTCTGGCTTTTGTTATGTCAATGATATTGTTCTTGGCATTCTTGAGCTTCTCAAGGTTCACAGGCGTGTATTGTATGTTGACATTGATGTCCACCACGGAGATGGTGTTGAGGAGGCATTTTACACCACTGACAGAGTGATGACAGTGTCTTTCCATAAGTTTGGGGACTTTTTCCCAGGCACTGGTCACATTAGAGACATTGGGGTGGGTCCTGGGAAGAACTATGCCGTGAATGTCCCACTGAATGATGGGATGGATGATGACAGTTTCCGTGATCTGTTTCGTCCCATCATTCAGAAAGTCATGCAGGTCTATCAACCAGAAGTAGTTGTTCTTCAATGTGGAGCTGATTCATTATCTGGTGATAGATTGGGTTGCTTCAACTTGTCTGTGAAGGGTCATGCTGAATGCCTTCGTTTTCTTAGATCTTTCAATGTTCCTTTAATGGTCTTGGGTGGGGGAGGATATACAATACGGAACGTTGCACGTTGCTGGTGTTATGAGACGGCTGTGGCAGTAGGAGTGGAACCTGAAAATAAGTTGCCTTACAATGAATATTATGAGTATTTTGGCCCAGATTATACTCTTCATGTTGATCCCAGTAACATGGAGAACCTAAACTCACCCAAGGATATGGAAAAGATAAGGAACATGCTACTAGAACAGCTTACTAGACTTCCCCATGCGCCTAGTGTACCTTTCCAAGTGACTCCATCCGTCAAAAAAGAACCCAAAGAGGAGGAAGAAGACATGGATCGTAGACCAAAGCGTCCCATATGGAGTGGTGAAGATTATGATTCCGACCCCGAGCAGGCTAGTTCAAGGTGCTCAAATTTAACTGGCCAACTGAGCAGGAATGTTGCGGATGAGATGGAAGAAGAGAAGCCACATCTGCATCCTTCATCTTG 1388 0.4777 MGESAMGGASLPSGPDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIIHYSLHRRMEINRPFPAGPDDIRRFHSDDYVEFLRRVTPETLGEITFSRQLKRFNVGEDCPVFDGLFNFCRASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGVGPGKNYAVNVPLNDGMDDDSFRDLFRPIIQKVMQVYQPEVVVLQCGADSLSGDRLGCFNLSVKGHAECLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVDPSNMENLNSPKDMEKIRNMLLEQLTRLPHAPSVPFQVTPSVKKEPKEEEEDMDRRPKRPIWSGEDYDSDPEQASSRCSNLTGQLSRNVADEMEEEKPHLHPSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01406 462 SUPERFAMILY Arginase/deacetylase 20 384 IPR023696 -
Bva06g01406 462 MobiDBLite consensus disorder prediction 431 445 - -
Bva06g01406 462 MobiDBLite consensus disorder prediction 447 462 - -
Bva06g01406 462 MobiDBLite consensus disorder prediction 400 430 - -
Bva06g01406 462 PRINTS Histone deacetylase signature 169 185 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 41 58 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 128 148 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 228 241 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 74 92 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 107 124 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PRINTS Histone deacetylase signature 245 263 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 PANTHER HISTONE DEACETYLASE 7 435 - -
Bva06g01406 462 PANTHER HISTONE DEACETYLASE 6 7 435 - -
Bva06g01406 462 Pfam Histone deacetylase domain 39 330 IPR023801 -
Bva06g01406 462 CDD HDAC_classI 25 332 - -
Bva06g01406 462 PIRSF HDAC_I_euk 7 459 IPR003084 GO:0004407|GO:0016575
Bva06g01406 462 Gene3D Histone deacetylase domain 18 393 IPR037138 -
Bva06g01406 462 MobiDBLite consensus disorder prediction 390 462 - -
Bva06g01406 462 PRINTS Histone deacetylase superfamily signature 267 277 IPR000286 -
Bva06g01406 462 PRINTS Histone deacetylase superfamily signature 150 173 IPR000286 -
Bva06g01406 462 PRINTS Histone deacetylase superfamily signature 182 197 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01406 Bva-Chr6 10384965 10388264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01406 K06067 - gmx:100807923 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00336 05 1646011 1649298 Bva06g01406 06 10384965 10388264 BWGD
Bva06g01406 06 10384965 10388264 Bva06g01406 06 10384965 10388264 ECH