Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01377 ATGGCTAGagctctttcttcttcctcttccttcaCTCATCGGCATCTCGCTCATATTCCCACCCTCAAACCACTCAGAAATTGTTCGTATATAAATTCAATCCCTTTCATAAAGCAAAGCAGGAGCGCTGCAATTGCTGCCCTGTCCAAGGTTGCTCCGAATGCACCCTCATCATCCATTAAGTCGGTCAACGAGTTGATTGAATCATTGATTAATCGGGTAGATTTATCGGAAGCCCAGGCTGAAGCGTCTCTTGACTTCTTACTCAATGAAGCGAATGAGGCTTTGATCAGCGCTGTTCTTGTGCTTTTGAGAGCCAAAGGAGAGACATTTGAAGAAATCGTGGGATTAGCAAGAGCGATGATTAAACATGCCACCAAGGTTGAAGGTTTATCTGATGCGGTTGACATTGTTGGGACTGGAGGTGATGGTGCAAACACTGTCAACATTTCAACTGGGGCTTCAATACTTGCTGCTGCTTGCGGTGCTAAAGTTGCAAAGCAAGGAAACCGTTCAAGCTCTTCTGCATGCGGAAGTGCTGATGTATTAGAAGAATTGGGAGTAATTATTGACTTGGATCCCGAGGGCATAACAAGGTGTGTAAATGAAGCAGGGATTGCTTTTATGATGTCTCCAAAGTACCATCCTGCAATGAAGATCGTCCGTCCTGTAAGAAAAACTCTGAAAGTTAAGACAGTATTCAATATATTGGGTCCCATGTTGAATCCAGCGCAGGTACCGTTCGCAGTTGTTGGAGTATACACGGAAGACTTGGTCCTCAAAATGGCTAAAGCACTTCAAAGATTTGGCATGAGAAGAGCTTTAGTTGTACACTCAGAAGGTTTGGATGAAATGAGTCCACTTGGACCAGGTATAGTCCTTGATGTCACTCCAGAAAGGATTGAGAAGTTCTCATTTGATCCATtGGATTATGGTATTGCTCGATGCAATCTCGATAGCTTAAAAGGTGGTGGCCCAGAATATAATGCAGAGGTTCTGACGCGTGTTTTAGCTGGAGAGAAAGGGGCTATTGCTGATGCTCTTGTTCTCAATGCAGCTGCGGCCCTCTTGGTCAGTGGCCATGTAAATAACCTATCTGAAGGAGTGGCTTTGGCACGTGAAACGCAAGAATCAGGAAAGGCTCTGAAGACTCTTAATTTGTGGAAGAATATCTCAAATaaaataaaagacgATGCCATCGTGAAGAATGCCTCATCATTTCATTTGTA 1229 0.4272 MARALSSSSSFTHRHLAHIPTLKPLRNCSYINSIPFIKQSRSAAIAALSKVAPNAPSSSIKSVNELIESLINRVDLSEAQAEASLDFLLNEANEALISAVLVLLRAKGETFEEIVGLARAMIKHATKVEGLSDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGNRSSSSACGSADVLEELGVIIDLDPEGITRCVNEAGIAFMMSPKYHPAMKIVRPVRKTLKVKTVFNILGPMLNPAQVPFAVVGVYTEDLVLKMAKALQRFGMRRALVVHSEGLDEMSPLGPGIVLDVTPERIEKFSFDPLDYGIARCNLDSLKGGGPEYNAEVLTRVLAGEKGAIADALVLNAAAALLVSGHVNNLSEGVALARETQESGKALKTLNLWKNISNKIKDDAIVKNASSFHL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01377 409 Pfam Glycosyl transferase family, helical bundle domain 65 125 IPR017459 -
Bva06g01377 409 Hamap Anthranilate phosphoribosyltransferase [trpD]. 65 391 IPR005940 GO:0000162|GO:0004048
Bva06g01377 409 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 133 395 IPR035902 -
Bva06g01377 409 TIGRFAM trpD: anthranilate phosphoribosyltransferase 67 389 IPR005940 GO:0000162|GO:0004048
Bva06g01377 409 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 50 128 - -
Bva06g01377 409 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 38 401 IPR005940 GO:0000162|GO:0004048
Bva06g01377 409 Coils Coil 60 80 - -
Bva06g01377 409 Pfam Glycosyl transferase family, a/b domain 133 382 IPR000312 GO:0016757
Bva06g01377 409 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 63 128 IPR036320 -
Bva06g01377 409 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 38 401 - -
Bva06g01377 409 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 129 401 IPR035902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01377 Bva-Chr6 10219615 10223087 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01377 K00766 - qsu:112019259 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01377 06 10219615 10223087 Bva05g00357 05 1771482 1774660 ECH
Bva06g01377 06 10219615 10223087 Bva06g01377 06 10219615 10223087 ECH