Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00357 ATGGCTAATGCTATTTCTTGCTCCTCTTCTTTCACTCATCGGTATCTCTCTCGCACTCTCACCCTCAAACCCCTCCGACATTGCTCGTTTAGACATTCGATCCCTTTCGTAAAGCAAAGGAGGAGCCCTGCAATTGCTGCCCTGACCACGGTTTCTCAGAATGCAGACACATCATCCTTTAAGTCGGTCAAAGAGTTGATTGAATCATTGATTAATCGGGTGGACTTATTGGAAGCTCAGGCTGAAGCGTCTCTTGACTTCTTACTTAGTGAAGCAAATGAGGCTTTGATCAGCGCTTTTCTAGTGCTTTTGAGAGCCAAAGGAGAGACATTTGAAGAAACCGTGGGATTAGCAAGAGCGATGATCAAACATGCCACCATGGTGGAAGGTTTGGCTGATGTGGTTGACATTGTTGGAACTGGAGGTGATGGTGCAAATACTGTCAACATTTCAACTGGGGCTTCAATACTTGCTGCTGCTTGCGGTGCTAAAGTTGCGAAGCAAGGAAACCGTTCAAGCTCTTCTGCGTGTGGAAGTGCTGATGTCTTAGAAGAATTAGGAGTAATTATTGACTTGGATCCTGAGGGGGTAAGAAGCTGTGTGAATGAAGCAGGAATTGGTTTTATGATGTCCCCAAAGTACCACCCCGCAATGAAGATTGTCCGTCCTGTAAGACAAATGCTAAAAGTGAAAACAGTATTCAATATATTAGGTCCTATGTTGAATCCAGCACGAGTACCTTTCGCAGTTGTTGGAGTATATACAGAAGACTTGGTCTTCAAAATGGCTAAAGCACTTCAAAGATTTGGCATGAGAAGAGCTTTAGTTGTCCACTCAGAAGGTTTGGATGAAATGAATCCACTtgGACCAGGTCTAGTCCTTGATGTCACTCCAGAAAGGATTGAGAAGTTCTCATTTGATCCATTGGATTATGACATCCCTCGATGCAATCTCCATGACTTAAAAGGCGGTGGCCCAGAATATAATGCAGAGGTTCTGAAGCGTGTTCTAGCTGGAGAGAGAGGAGCTATTGCTGATGCTTTTGTTCTCAATGCAGCAGCGGCTCTCTTGGTCAGTGGCCATGTAAATAACCTATCTGATGGTGTGTCTTTGGCACGTGAAACGCAACAATCGGGAAAGGCTCTGAAGACCCTTAACTTGTGGAAGGATATCTCAAATaaaataaaagaggatGCAACCGTGAAGAATTCCTG 1214 0.4399 MANAISCSSSFTHRYLSRTLTLKPLRHCSFRHSIPFVKQRRSPAIAALTTVSQNADTSSFKSVKELIESLINRVDLLEAQAEASLDFLLSEANEALISAFLVLLRAKGETFEETVGLARAMIKHATMVEGLADVVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGNRSSSSACGSADVLEELGVIIDLDPEGVRSCVNEAGIGFMMSPKYHPAMKIVRPVRQMLKVKTVFNILGPMLNPARVPFAVVGVYTEDLVFKMAKALQRFGMRRALVVHSEGPGLVLDVTPERIEKFSFDPLDYDIPRCNLHDLKGGGPEYNAEVLKRVLAGERGAIADAFVLNAAAALLVSGHVNNLSDGVSLARETQQSGKALKTLNLWKDISNKIKEDATVKNS 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00357 396 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 47 128 - -
Bva05g00357 396 Pfam Glycosyl transferase family, a/b domain 133 374 IPR000312 GO:0016757
Bva05g00357 396 TIGRFAM trpD: anthranilate phosphoribosyltransferase 67 381 IPR005940 GO:0000162|GO:0004048
Bva05g00357 396 Coils Coil 60 80 - -
Bva05g00357 396 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 63 128 IPR036320 -
Bva05g00357 396 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 38 394 - -
Bva05g00357 396 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 129 393 IPR035902 -
Bva05g00357 396 Pfam Glycosyl transferase family, helical bundle domain 64 125 IPR017459 -
Bva05g00357 396 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 38 394 IPR005940 GO:0000162|GO:0004048
Bva05g00357 396 Hamap Anthranilate phosphoribosyltransferase [trpD]. 65 383 IPR005940 GO:0000162|GO:0004048
Bva05g00357 396 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 133 387 IPR035902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00357 Bva-Chr5 1771482 1774660 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00357 K00766 - qsu:112019259 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01377 06 10219615 10223087 Bva05g00357 05 1771482 1774660 ECH
Bva05g00357 05 1771482 1774660 Bva05g00357 05 1771482 1774660 ECH