LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g01360	ATGCTGAGACTCGCTTCCCAGAGAATTTTGGGGATAGCATCGCGGGAGGCGCCGTCGTCGTCTATCCGTGTTCTGCCGCGTTTGTACCACCAGAGGGTTGTTGATCATTACGACAACCCCAGGAATGTTGGATCGTTCGATAAGAATGACCCGACAGTGGGTACCGGTTTGGTGGGGGCACCCGCTTGTGGGGACGTCATGAAACTCCAGATTAAGGTTGATGAGAAGACTGGGAAGATTGTTGATGCTCGCTTCAAGACTTTTGGCTGTGGATCGGCCATTGCCTCTTCGTCTGTGGCTACTGAATGGGTAAAGGGGAAGCAAATGGAGGAAGTTTTATCCATTAAAAACACGGAAATTGCAAAACATCTTTCTCTTCCACCAGTTAAGCTTCATTGCAGCATGCTTGCTGAGGATGCTATAAAAGCTGCTGTTAAAGATTATGAAGCTAAGCGAGCCAAGGAATCTGCAAATGGAGGGGCAACACCTGGAGAGAAGGCTACTAGCGCTTG	512	0.4922	MLRLASQRILGIASREAPSSSIRVLPRLYHQRVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKESANGGATPGEKATSA	170

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g01360	170	PANTHER	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	1	119	-	-
	Bva06g01360	170	PANTHER	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	119	167	-	-
	Bva06g01360	170	SUPERFAMILY	SufE/NifU	28	155	-	-
	Bva06g01360	170	TIGRFAM	iscU: FeS cluster assembly scaffold IscU	29	152	IPR011339	GO:0005506\|GO:0016226\|GO:0051536
	Bva06g01360	170	Pfam	NifU-like N terminal domain	29	154	IPR002871	GO:0005506\|GO:0016226\|GO:0051536
	Bva06g01360	170	Gene3D	-	28	167	-	-
	Bva06g01360	170	CDD	IscU_like	28	144	IPR002871	GO:0005506\|GO:0016226\|GO:0051536
	Bva06g01360	170	PANTHER	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	119	167	IPR002871	GO:0005506\|GO:0016226\|GO:0051536
	Bva06g01360	170	PANTHER	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	1	119	IPR002871	GO:0005506\|GO:0016226\|GO:0051536

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g01360	Bva-Chr6	10143802	10146188	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g01360	K22068		-	gmx:100806169	294.278

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva05g00365	05	1808995	1811838	Bva06g01360	06	10143802	10146188	BWGD