Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00365 atgTTGAGACTCACTTCCAAGAGACTTTTGGGGATAACGTCGCCACCGTCGCAGGCCTTCCGGGTTCTTCCGCGTTTGTACCACGAGAGGGTTGTTGATCACTATAACAACCCCAGGAATGTTGGATCGTTCGATAAGAATGACCTGACTGTGGGTACGGGTTTGGTCGGGGCACCCGCCTGTGGGGATGTCATGAAACTCCAAATTAAGGTCGATGAGGAGACTGGAAAGATTGTTGATGCTCGCTTCAAGACTTTCGGCTGCGGATCGGCCATTGCCTCTTCGTCTGTAGCAACCGAATGGGTAAAGGGGAAGCACACGGAGGAAGTTTTGTCCATTAAGAACACGGAAATTGCAAAACATCTTTCCCTTCCGCCGGTCAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAGCGAGCCAAGGAATCTGCAAGCGGAGGGGCAGCATCTGGAGAGAAGGTTGCCACGGCTTG 506 0.5079 MLRLTSKRLLGITSPPSQAFRVLPRLYHERVVDHYNNPRNVGSFDKNDLTVGTGLVGAPACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKHTEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKESASGGAASGEKVATA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00365 168 Pfam NifU-like N terminal domain 27 152 IPR002871 GO:0005506|GO:0016226|GO:0051536
Bva05g00365 168 SUPERFAMILY SufE/NifU 26 153 - -
Bva05g00365 168 TIGRFAM iscU: FeS cluster assembly scaffold IscU 27 150 IPR011339 GO:0005506|GO:0016226|GO:0051536
Bva05g00365 168 CDD IscU_like 26 142 IPR002871 GO:0005506|GO:0016226|GO:0051536
Bva05g00365 168 Gene3D - 26 166 - -
Bva05g00365 168 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 5 161 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00365 Bva-Chr5 1808995 1811838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00365 K22068 - gmx:100806169 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00365 05 1808995 1811838 Bva06g01360 06 10143802 10146188 BWGD