Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01348 ATGCCGGGAATTGTTGCAAATGGTATTAAGGATGAGGGGGGAGCTCATGAAATGAATGAGAACCCCTCCAAGGGTACCTCATCTCCTGTCAAGTCTCATAGAAATTCTTCGAGTCCACATAACCCCCAGGATGGTGGTCAAAATTTTCCAGTTGATGGGGTGGTTGACACCTCGATTGAGCAGCTTTATGAAAACGTCTGTGACATGCAAAGTTCTGATCAGTCACCCTCAAGGCAAAGTTTTGGATCTGATGGTGAGGAGTCTAGGATTGATTCAGAATTGCGCCATTTAGTTGGAGGACAGATGAGAGAGGTTGAGATCATGGAAGAGGAAGTGGAGGAAAAGCCTGGAGGTGAATCCAGTAGTGAAGCATCGTCTAGATCTAGAAAGGGTAGTTCAAATGACAAGAAGTTGGAAAAACGGAATGAGATTCAATCTGCAAGTTCAAGTCCTGTTTCTtccaaaaaatcaaacaaaccaTCAAACACACGGTTAGACCGtgaaatatcatcaaaatcaagacCCAAGGGCAAAAGTCCTCCAGAGAAACCTCCTATCAGTAGGAGGAACCATAAACCtctgcaaaaacaaaatacaggAGTTATTCGCACAACGAAGTCCAAGATTTCTCCTTCAGGAAGGAAGTCACTAAATCGAGCTGAGAATTCAACTGACTCATCAGATAAGCCTGAGGAGGCACCAATTTTACTAAAGCAAGCAAGGGATTTAATGTCATCAGGAGATAATCCACAAAAAGCTCTTGAGTTAGCTCTTCAAGCAATGACATTGTTTGAGAAGTATGCTGATGGGAAACCGAGTCTGGGGTTGGTTATGTGTTCACATGTTACTGCAGCAATATATTGTAGCTTGGGCCAATACAATGAGGCAATTCCAATTCTTGAACACTCCATTGAGATTCCTGTTATTGAGAAAGGCCAAGACCATGCCCTCGCTAAATTTACTGGTCACATGCAGCTAGGTGACACCTATGCAATGCTGGGTCAGCTTGAAAATTCAATCATGTGTTACAATACTGGGTTGGAAATCCAGAGGCAGGTTCTGGGAGAAACAGACCCAAGAGTTGGTGAAACCTGTAGGTATGTAGCTGAAGCTCACGTTCAAGCATTGCAGTTTGATGAAGCTGAGAAGCTCTGCCAAATGGCTCTTGACATTCATAAAGCAAATGGTTCGCCCCATTCTCTTGAAGAGGCGGCAGATAGGAGGCTCATGGGTCTTATATGTGAAACAAAGGGAAACCATGAAGCAGCTTTAGAGCATCTTGTTTTAGCCAGCATGGCAATGGTAGCAAATGGCCAGGAAGCGGAAGTGGCATCTGTTGACTGCAGCATTGGAGACACATACTTATCCTTGCTTCGTTATGATGAGGCTATTTTCGCTTATCAAAAAGCGCTTGCAGCTTTCAAGACTAGCAAAGGAGAGAATCATCCAGCTGTTGGTTCAGTCTTTGTACGTTTGGCTGAACTGTATAGCAGGACAGGGAAGATAAGGGAATCAAAATCATACTGTGAGAGTGCACTCAGAATCTACGAGCATCCCATGCCTGGAGTGCCTCCTGAGGAGATTGCAAGTGGTCTTACGGATGTTTCAGCTATCTATGAATCAATGAATGAGCTTGAAAAGGCACTCGAGTTACTGCAGAAAGCATTGCAAATATATAATGATGCTCCTGGTCAGCACAGCACAATAGCAGGTATTGAAGCTCAAATGGGGGTCATGTACTACATGATGGGAAAGTATGCTGAATCTTACAACAATTTCAAGAACGCCATCACAAAGCTTCGTGCAATTGGAGAGAAGAAATCAGCCTTCTTTGGTATTGCTCTTAATCAAATGGGTCTTGCTTGTGTGCAGCGTTATGCTTTAAGTGAAGCTGCAACATTATTTGAAGAAGCAAAGATTATTTTAGAACAGGAGTATGGGCCGTATCACCCTGAAACGCTTGGAGTTTATAGCAATCTTGCTGGCACATATGATGCTATTGGCAGGCTGGATGAAGCCATTGAAATTCTGGAATACATTGTTGCTATGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGATGTGGACGAAGAGAAGAGGAGGTTGGGCGAATTGTTGAAAGAAGCAGGTAGAGTTCGGAGCAGAAAAGCTAGGTCACTTGAAAACCTTCTTGATGCCAATCCTCGTGTCGTAAACAACATTTTCATTGGGGCCAGATG 2219 0.4272 MPGIVANGIKDEGGAHEMNENPSKGTSSPVKSHRNSSSPHNPQDGGQNFPVDGVVDTSIEQLYENVCDMQSSDQSPSRQSFGSDGEESRIDSELRHLVGGQMREVEIMEEEVEEKPGGESSSEASSRSRKGSSNDKKLEKRNEIQSASSSPVSSKKSNKPSNTRLDREISSKSRPKGKSPPEKPPISRRNHKPLQKQNTGVIRTTKSKISPSGRKSLNRAENSTDSSDKPEEAPILLKQARDLMSSGDNPQKALELALQAMTLFEKYADGKPSLGLVMCSHVTAAIYCSLGQYNEAIPILEHSIEIPVIEKGQDHALAKFTGHMQLGDTYAMLGQLENSIMCYNTGLEIQRQVLGETDPRVGETCRYVAEAHVQALQFDEAEKLCQMALDIHKANGSPHSLEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGQEAEVASVDCSIGDTYLSLLRYDEAIFAYQKALAAFKTSKGENHPAVGSVFVRLAELYSRTGKIRESKSYCESALRIYEHPMPGVPPEEIASGLTDVSAIYESMNELEKALELLQKALQIYNDAPGQHSTIAGIEAQMGVMYYMMGKYAESYNNFKNAITKLRAIGEKKSAFFGIALNQMGLACVQRYALSEAATLFEEAKIILEQEYGPYHPETLGVYSNLAGTYDAIGRLDEAIEILEYIVAMREEKLGTANPDVDEEKRRLGELLKEAGRVRSRKARSLENLLDANPRVVNNIFIGAR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01348 739 Coils Coil 535 562 - -
Bva06g01348 739 MobiDBLite consensus disorder prediction 129 143 - -
Bva06g01348 739 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 727 - -
Bva06g01348 739 SUPERFAMILY TPR-like 228 350 IPR011990 GO:0005515
Bva06g01348 739 MobiDBLite consensus disorder prediction 63 83 - -
Bva06g01348 739 SUPERFAMILY TPR-like 406 517 IPR011990 GO:0005515
Bva06g01348 739 ProSiteProfiles TPR repeat profile. 444 477 IPR019734 GO:0005515
Bva06g01348 739 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 727 - -
Bva06g01348 739 SUPERFAMILY TPR-like 566 712 IPR011990 GO:0005515
Bva06g01348 739 Pfam MalT-like TPR region 247 432 IPR041617 -
Bva06g01348 739 MobiDBLite consensus disorder prediction 191 220 - -
Bva06g01348 739 MobiDBLite consensus disorder prediction 84 120 - -
Bva06g01348 739 MobiDBLite consensus disorder prediction 160 189 - -
Bva06g01348 739 SUPERFAMILY TPR-like 323 598 IPR011990 GO:0005515
Bva06g01348 739 Gene3D Tetratricopeptide repeat domain 606 724 IPR011990 GO:0005515
Bva06g01348 739 ProSiteProfiles TPR repeat profile. 529 562 IPR019734 GO:0005515
Bva06g01348 739 MobiDBLite consensus disorder prediction 1 233 - -
Bva06g01348 739 SMART tpr_5 486 519 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 612 645 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 362 395 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 444 477 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 570 603 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 654 687 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 320 353 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 529 562 IPR019734 GO:0005515
Bva06g01348 739 SMART tpr_5 277 310 IPR019734 GO:0005515
Bva06g01348 739 MobiDBLite consensus disorder prediction 144 159 - -
Bva06g01348 739 Gene3D Tetratricopeptide repeat domain 198 406 IPR011990 GO:0005515
Bva06g01348 739 Gene3D Tetratricopeptide repeat domain 427 605 IPR011990 GO:0005515
Bva06g01348 739 MobiDBLite consensus disorder prediction 20 45 - -
Bva06g01348 739 Pfam Tetratricopeptide repeat 613 685 - -
Bva06g01348 739 Pfam Tetratricopeptide repeat 443 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01348 Bva-Chr6 10048058 10051796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01348 - - mtr:MTR_3g077950 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01348 06 10048058 10051796 Bva05g00371 05 1841091 1849715 ECH
Bva06g01348 06 10048058 10051796 Bva06g01348 06 10048058 10051796 ECH