Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00371 ATGCAAAGTTCTGATCACTCACCCTCAAGGCGAAGTTTTGGATCTTATGGGGAGGAGTCTAGGACTGATCCAGAATTGCACGGTTTAGTTGGAGGACAGATGAGGGAGGTTGAGATAAGGGAAGAGGAAGTGGAGGAAAAGCCAGGAGATGATTCCAGTAACGAAACATCGTCAAGAAAAAGTACTTCAAATGATAAGCCGTTGGAAAATCTGGATGAGATTCCTTCTGCAAGTTCAAGTTCagtttcttcaaaaaaacCAAACAAGCCATCAAAATCACGGTTAGACAGTGAAACATCATCAAGATCGAGACCCAAGGGCAAAAGTCCTCCAGAGAAACCTCCTATTAACTGGAGGAACGATAAACAtcagcaaaaacaaaatacatggGTTACTCGCACAACGAAACCTAAGGTTTCTCCTTCACGAAGGAAGTCACAAAATCAAACTCAGAATTTAACTGACTTAGCATCAGATAAGCCTGAGCAGGCACCAATTTTACTAAAGCAAGCAAGGGATTTGATGTCATCAGGAGATAATCAGCAAAAGGCTCTTGAATTAGCTCTTCAAGCAATGACATTGTTTAAGAAGCATGCTATTGGAAAACCAAGTTTAGGGTTGGTTATGTGTTCACATGTTACTGCAGCAATATATTGTAGCTTGGGCCAATACAGCGAAGCAATTCCAATTCTTGGGCACTCCATTGAGATCCCTGTTATTGAGGAAGGACAAGAGCATGCCCTTGCTAAGTTTGCTAGTCACATGCAACTAGGTGACACTTACGCAATGCTAGGTCAGCTTGGGAAATCAATTATGTGTTACAATACTGGGTTGGAAATCCAGAGGCAGGTTCTGGGAGAAACAGACCCAAGAGTTGGTGAAACTTGCAGGTATGTAGCTGAAGCTCACGTTCAAGCATTGCAATTTGATGAGGCTGAGAAGCTCTGCCAAATGGCTCTTGACATCCATAAAGCAAATGGTTCACCCCAATCTCCTGAAGAGGCGGCGGATAGGAGGCTCATGGGTCTTATATGTGAAACAAAGGGAAAACATGAAGCAGCTCTAGAGCACCTTGTTTTAGCCAGCATGGCGATGGTAGCAAATGGCCAGGAAGCGGAAGTGGCATCTGTTGACTGCAGCATTGGAGATGCATATTTATCCATGCTTCGGTATGATGAGGCTGTTCTTGCTTATCAGAAAGCCCTTACAGCTTTCAAGACTAGCAAAGGAGAGAACCATCTGGCCGTGGGTTCAGTGTACGTACGCTTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCATACTGTGAGAGTGCACTCAGAATCTATGAGCAGCCCATGCCCGGGGCGCTCCCCGAGGAGATTGCAAGTGGCCTTACGGATGTTTCAGCTATCTACGAGTCAATGAATGAGCTTGAGCAGGCACTTGAGTTACTGCAAAAGGCTTTGGAAATATATAATGATGCTCCTGGTCAGCTGAGCACTATAGCAGGAATTGAAGCTCAAATGGGGGTCATGTACTACATGTTAGGGAAGTATGCTGAATCTTACAGCACTTTCAAGAGCGCCATCACGAAGCTTCGTGCAACTGGAGAGAAGAAATCTGCATTCATGGGTATTGCTCTTAATCAAATGGGCCTTGCTTGTGTGCAACGTTATGCTTTAAGTGAAGCTACAACATTATTTGAAGAAGCAAAGACTATTTTTGAACAGGAGTATGGGCCTTACCACCCTGAAACGCTTGGAGTATGCAGCAATCTTGCTGGTACATATGATGCTATTGGCAGGCTGGACGAAGCAATTGAAATTCTGGAATACATTGTTCGTACGAGGGAGGAAAAACTTGGGACAGCAAATCCTGACGTGGATAATGAGAAGAGAAGGTTAGATGAATTGTTGAAAGAAGCAGGTAGAGTTCGGAGCAGAGAAGCTAGGTCACTTGAAAACCTTCTTGATGGCAATGAGGTGAACATGGCTACCCAATCCGCCTCTCCTCCTGATTCTACCGCTGAAAAACCTCAAAGCCCAGGTGTAGCTGCCGAAATTGTGCAACCAACAAATGTAGGTCAGCAAAATGGCAGGGAGGAGCCTGTTGAACGGAGTTCACCAACATCAGTATTTGTGAACTCAGAACCAATGCGGGAGGAACAGATACAGAACGCCGTGAAATTTCTATCACACCCAAGAGTTAGAGGTTCCCCTGTCGTGCACAGACGAGCATTTCTAGAGAAGAAGGGCCTCACAAAGGAGGAAATAGACGAAGCCTTTCGCCGTGTGCCTGATTCACCTCCAACTGGGCAAACAGCTGGTACAAAGCAAGATGAACAGTTGAAGCCATCACCAAATCTTCAGCAACAAGCCCAGCCACAAACTTTGCAGCCGGGTGTATCTGCTTCTACTGGTGCCACAACTTCATTGGTAGCCTTATCACGCTCCCGATTCCACTGGTCCCACGCCCTCATTGCAATTGGGATACTGGCTGCTTCCGGTGCTGGAACAGCTGTACTAATCAAGAAATCCGTTCTTCCTTGGTTAAAATCTTGGATTCGCAAGGTTGTCTTGGAACAAGACAATGaccaattgaagaaaatagacTCAAAACCAACatcagaagaagaagctgCACAGGCTGCAAAAGCAGCAGCAGCTGCAGCAGCAGATGTGGCCAAAGCTACCCAGCAAATGTTGACTTCAAAAAGTGAAGAGAGGCAATACTTTGAGGAATTTTCAGGCCTTTTAGATAAGCAAGTTCAGGAAATGAAGTCAATGACTAATGCAATAAGAAGATTGGAAGGACAAACAATAGCTTCTAGCGGAGCCTATCATTTAGAACCAGAAAATCACCGAGTCACTCAAACAAGTTCAAAGCAACCATTTGTTAATGGCAAGGTGGATTATGACCTGCGTTCAGTGAGATCTTCATCACCATCTGTATCTATCAAACCGTCTGCTGCTTCTCATCCAAAGTCATATATGGAGATCATGGCCATGGTCCAAAGAGGAGAGAAGCCTTCTAACATAAGAGATATAAATGATGCACCCCCCAACCCTAATCAGCAACCATCAAATCCTCGCTTAACTCCTAAAGCCAAGCCTTGGGAGGTTAGTCAAGTGCAGAACTCCTCCACCCAAGTGCTTCAGTATCAAGTAAATGGTAAAGGCTTGGATTACAATGTTCAAGGCGGCATTCAAACAAATGGTGACATCCCAGTGCCCTGGTGGGAAAGGAAAAATGTCAGAATCAGAGAGGTTGAGAATGAAAATGGGCTTAATGCAGCGCATTATGGTGCTCAATCGAGTCAGCAGCCAGTGCAACGTGCTTGGGTTCCTCCTCAGCCTCCTCCAATAGCGATGGCGGAGGCTGCAGAAGCCATCAGTCGCCCAAAGCCAATGGTCCGGCAGGAAGAAGCCCCAGATGATGAGACAGTCGCTCAGTCTTCAGACAAGTCAGATGAGGTGGTGACGATTAAAACATCTGAATACGAAGGTGCAATAAAGGACAGCAGCGTTAGTTCTGGCGAGatacaagaaaacaaatttgaagagaaatg 3563 0.4434 MQSSDHSPSRRSFGSYGEESRTDPELHGLVGGQMREVEIREEEVEEKPGDDSSNETSSRKSTSNDKPLENLDEIPSASSSSVSSKKPNKPSKSRLDSETSSRSRPKGKSPPEKPPINWRNDKHQQKQNTWVTRTTKPKVSPSRRKSQNQTQNLTDLASDKPEQAPILLKQARDLMSSGDNQQKALELALQAMTLFKKHAIGKPSLGLVMCSHVTAAIYCSLGQYSEAIPILGHSIEIPVIEEGQEHALAKFASHMQLGDTYAMLGQLGKSIMCYNTGLEIQRQVLGETDPRVGETCRYVAEAHVQALQFDEAEKLCQMALDIHKANGSPQSPEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEAEVASVDCSIGDAYLSMLRYDEAVLAYQKALTAFKTSKGENHLAVGSVYVRLADLYNRTGKIRESKSYCESALRIYEQPMPGALPEEIASGLTDVSAIYESMNELEQALELLQKALEIYNDAPGQLSTIAGIEAQMGVMYYMLGKYAESYSTFKSAITKLRATGEKKSAFMGIALNQMGLACVQRYALSEATTLFEEAKTIFEQEYGPYHPETLGVCSNLAGTYDAIGRLDEAIEILEYIVRTREEKLGTANPDVDNEKRRLDELLKEAGRVRSREARSLENLLDGNEVNMATQSASPPDSTAEKPQSPGVAAEIVQPTNVGQQNGREEPVERSSPTSVFVNSEPMREEQIQNAVKFLSHPRVRGSPVVHRRAFLEKKGLTKEEIDEAFRRVPDSPPTGQTAGTKQDEQLKPSPNLQQQAQPQTLQPGVSASTGATTSLVALSRSRFHWSHALIAIGILAASGAGTAVLIKKSVLPWLKSWIRKVVLEQDNDQLKKIDSKPTSEEEAAQAAKAAAAAAADVAKATQQMLTSKSEERQYFEEFSGLLDKQVQEMKSMTNAIRRLEGQTIASSGAYHLEPENHRVTQTSSKQPFVNGKVDYDLRSVRSSSPSVSIKPSAASHPKSYMEIMAMVQRGEKPSNIRDINDAPPNPNQQPSNPRLTPKAKPWEVSQVQNSSTQVLQYQVNGKGLDYNVQGGIQTNGDIPVPWWERKNVRIREVENENGLNAAHYGAQSSQQPVQRAWVPPQPPPIAMAEAAEAISRPKPMVRQEEAPDDETVAQSSDKSDEVVTIKTSEYEGAIKDSSVSSGEIQENKFEEK 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00371 1187 MobiDBLite consensus disorder prediction 657 716 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 758 802 - -
Bva05g00371 1187 SMART tpr_5 543 576 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 417 450 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 375 408 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 251 284 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 460 493 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 585 618 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 501 534 IPR019734 GO:0005515
Bva05g00371 1187 SMART tpr_5 293 326 IPR019734 GO:0005515
Bva05g00371 1187 MobiDBLite consensus disorder prediction 1129 1187 - -
Bva05g00371 1187 Pfam Family of unknown function (DUF5572) 991 1039 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 34 54 - -
Bva05g00371 1187 Gene3D - 710 771 IPR036388 -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 121 158 - -
Bva05g00371 1187 Coils Coil 626 646 - -
Bva05g00371 1187 Gene3D Tetratricopeptide repeat domain 142 361 IPR011990 GO:0005515
Bva05g00371 1187 ProSiteProfiles TPR repeat profile. 375 408 IPR019734 GO:0005515
Bva05g00371 1187 MobiDBLite consensus disorder prediction 89 120 - -
Bva05g00371 1187 Coils Coil 917 937 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 657 675 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 684 716 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 1133 1151 - -
Bva05g00371 1187 Gene3D Tetratricopeptide repeat domain 362 542 IPR011990 GO:0005515
Bva05g00371 1187 MobiDBLite consensus disorder prediction 1 15 - -
Bva05g00371 1187 ProSiteProfiles TPR repeat profile. 460 493 IPR019734 GO:0005515
Bva05g00371 1187 MobiDBLite consensus disorder prediction 768 802 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 1009 1034 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 73 88 - -
Bva05g00371 1187 SUPERFAMILY TPR-like 166 621 IPR011990 GO:0005515
Bva05g00371 1187 Pfam Pex14 N-terminal domain 718 762 IPR006785 -
Bva05g00371 1187 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 658 - -
Bva05g00371 1187 Gene3D Tetratricopeptide repeat domain 574 657 IPR011990 GO:0005515
Bva05g00371 1187 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 658 - -
Bva05g00371 1187 Pfam Tetratricopeptide repeat 544 609 - -
Bva05g00371 1187 Pfam Tetratricopeptide repeat 374 449 - -
Bva05g00371 1187 Coils Coil 466 493 - -
Bva05g00371 1187 MobiDBLite consensus disorder prediction 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00371 Bva-Chr5 1841091 1849715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00371 - - qsu:112040931 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00371 05 1841091 1849715 Bva06g01351 06 10060699 10065781 BWGD
Bva06g01348 06 10048058 10051796 Bva05g00371 05 1841091 1849715 ECH
Bva05g00371 05 1841091 1849715 Bva05g00371 05 1841091 1849715 ECH