Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01334 ATGGACAGCATCATCAGTTTCATGGTTCCTCATTCTTCATGTTTGACCTATAATGGTAAAAATGGCGTCTCTGCTCTCCCGAACAGAGCTTCACAAGTACTGCATAATGAAGAGCCTGATAGTCATATCCACCCGAAGGTTCCTGGATGGTTTTCTGAGGATTGTCCAATATGGCCAGGACAAGCACACTTTTTGAGGGTAGAGAAGATTCTGTTCCAAGGGAAGTCTAAATACCAAAGTATGATGGTATTTCAGTCATCAACCTATGGCAAGGTTTTCGTTCTGGATGGAGCACTCCAGCTCACTGAGAAGGACGAATGTTCTTACCAAGAAATGATGACCCATCTTCCCCTTTGTTCTATTCCAAACCccaaaaagGTAATGCTAATTGGTGGTGGGGATGGTGGCATTCTCAGAGAAATATCCCGCCACTCGTCTGTTGAGCAGATTGACATATGTGAAATAGACACTATGCTGATTGATgtttataaagaatttttcccAGACGTAGCCATTGGATACGAGGACTGTCGCGTCAAACTTCACGTTACAGATGGAACTCTATTTCTGAATTCTGTTCCAAGTGGCACCTACGATGCAATAATAGTGGACGCCTTTGACCCAATAaGGCCTGATCATGAGCTTTTTGAATCTGAATTCTTTGAATTGGTCTCAAAAGCTCTCCGGCCAGGTGGGGTCCTGTGCATCCAAGCAGAGAGCATATGGTTCAAGTCCCTTGACATCGAACAGCTTCTCACAAAATGTCGTCAAATATTCAAAGGCTGTGTTGATTATGCATGGACAACTGTTCCTGCATATCCAAGtGGGGTCATCGGTTTCTTGCTTTGTTCTACTGATGGCCCATGCGTCGACTTCAGAAATCCAATTAACCCAATAGATCCCCAAAATTATGGCATATCAAAGCAGCCCTTGAAGTTTTACACCACAGAGGTTCATTCAGCTGCATTTTGCTTGCCGTCCTTTGCCAAAAAGTTCACTGACCCCAAAGCCAAGAGCAGCAGTTGCAATGGTTTTGATAGAGAGAGACACTA 1052 0.4306 MDSIISFMVPHSSCLTYNGKNGVSALPNRASQVLHNEEPDSHIHPKVPGWFSEDCPIWPGQAHFLRVEKILFQGKSKYQSMMVFQSSTYGKVFVLDGALQLTEKDECSYQEMMTHLPLCSIPNPKKVMLIGGGDGGILREISRHSSVEQIDICEIDTMLIDVYKEFFPDVAIGYEDCRVKLHVTDGTLFLNSVPSGTYDAIIVDAFDPIRPDHELFESEFFELVSKALRPGGVLCIQAESIWFKSLDIEQLLTKCRQIFKGCVDYAWTTVPAYPSGVIGFLLCSTDGPCVDFRNPINPIDPQNYGISKQPLKFYTTEVHSAAFCLPSFAKKFTDPKAKSSSCNGFDRERH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01334 350 Gene3D Vaccinia Virus protein VP39 103 337 IPR029063 -
Bva06g01334 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 332 IPR029063 -
Bva06g01334 350 Pfam Spermine/spermidine synthase domain 106 292 - -
Bva06g01334 350 Hamap Polyamine aminopropyltransferase [speE]. 49 334 IPR001045 GO:0003824
Bva06g01334 350 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 48 285 IPR030374 -
Bva06g01334 350 TIGRFAM speE: spermidine synthase 50 328 IPR001045 GO:0003824
Bva06g01334 350 PANTHER SPERMIDINE SYNTHASE 45 334 - -
Bva06g01334 350 Gene3D Spermidine synthase, tetramerisation domain 34 102 IPR037163 -
Bva06g01334 350 PANTHER SPERMIDINE/SPERMINE SYNTHASE 45 334 IPR001045 GO:0003824
Bva06g01334 350 Pfam Spermidine synthase tetramerisation domain 49 103 IPR035246 -
Bva06g01334 350 CDD AdoMet_MTases 148 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01334 Bva-Chr6 9992286 9995282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01334 K00797 - gmx:100785862 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01334 06 9992286 9995282 Bva05g00382 05 1892686 1895447 ECH
Bva06g01334 06 9992286 9995282 Bva06g01334 06 9992286 9995282 ECH