Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01321 ATGGCTTCAACTGATTCAAGGTTCATCAAGTGTGTGACGGTTGGAGACGGAGCTGTGGGCAAGACTTGCATGCTAATTTGCTACACTAGCAATAAATTCCCGACAGATTACATTCCCACGGTGTTCGATAACTTCAGTGCCAATGTCGTCGTTGAAGGCACAACAGTCAATTTAGGCCTCTGGGACACCGCTGGGCAAGAGGATTACAACAGACTGAGGCCTTTGAGCTACAGAGGGGCAGATGTCTTTGTCTTGGCTTTCTCTTTAGTTAGTCGTGCAAGCTATGAGAACGTGCTCAAGAAGTGGATCCCTGAACTCCAGCACTATGCCCCTGGCATCCCTGTGTTACTTGTTGGTACCAAATTGGATCTCCGAGAAGACAAACATTATTTAGCTGACCATCCTGGTCTGGTGCCAGTGACTGCTGAGCAGGGTGAGGAACTCCGTAAACAGATTGGAGCAACATATTATATTGAGTGCAGCTCGAAAACTCAGCAGAATGTGAAGTCAGTTTTTGATGCTGCCATCAAGGTGGTCATCAAGCCGCCCCAAAAACAGCacgagaagaagaagaaaaagcagcGTCGAGGGTGTCTGCTAAACGTCTTATGTGGAAGGAATCTTGTCCAATCTTA 635 0.4567 MASTDSRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHYAPGIPVLLVGTKLDLREDKHYLADHPGLVPVTAEQGEELRKQIGATYYIECSSKTQQNVKSVFDAAIKVVIKPPQKQHEKKKKKQRRGCLLNVLCGRNLVQS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01321 211 SMART rab_sub_5 9 182 - -
Bva06g01321 211 SMART ras_sub_4 6 182 - -
Bva06g01321 211 PANTHER RHO FAMILY GTPASE 1 203 IPR003578 GO:0005525|GO:0007264
Bva06g01321 211 Gene3D - 2 201 IPR027417 -
Bva06g01321 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Bva06g01321 211 Pfam Ras family 10 179 IPR001806 GO:0003924|GO:0005525
Bva06g01321 211 CDD Rop_like 8 180 - -
Bva06g01321 211 PRINTS Transforming protein P21 ras signature 111 124 - -
Bva06g01321 211 PRINTS Transforming protein P21 ras signature 9 30 - -
Bva06g01321 211 PRINTS Transforming protein P21 ras signature 32 48 - -
Bva06g01321 211 PRINTS Transforming protein P21 ras signature 157 179 - -
Bva06g01321 211 PRINTS Transforming protein P21 ras signature 49 71 - -
Bva06g01321 211 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Bva06g01321 211 ProSiteProfiles small GTPase Rab1 family profile. 3 211 - -
Bva06g01321 211 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Bva06g01321 211 ProSiteProfiles small GTPase Ras family profile. 4 200 IPR001806 GO:0003924|GO:0005525
Bva06g01321 211 TIGRFAM small_GTP: small GTP-binding protein domain 9 173 IPR005225 GO:0005525
Bva06g01321 211 PANTHER RAC-LIKE GTP-BINDING PROTEIN ARAC10-RELATED 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01321 Bva-Chr6 9946907 9949812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01321 9 207 EF-hand Containing Proteins AT5G27540 22.549 1.20e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01321 K04392 - gmx:100806681 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00388 05 1916280 1918760 Bva06g01321 06 9946907 9949812 BWGD
Bva06g01321 06 9946907 9949812 Bva06g01321 06 9946907 9949812 ECH