Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01280 ATGGAGGCCATAAAGATGGCCGAGATGTGGGCGACAATGGGGTCTACTCTTGCTAGCATCATGTTCTTGTGGGCAATCATTCGCCAGTATTGTCCCGTCGAGGTACGCCGTTTCTTCGAGAAGTACACTCACAGGGTTATGGGCTACTTGTACCCCTATATCCGAATCTCTTTCCATGAATTTTTGGGTGAGAGACTCAGGCGCAGTGAAGCATATAGTGCTGTGGAGGCATACCTTAGTGCCAACACATCAAAGAGCGCTAAAAGGTTGAAAGCAGAGATGGGAAAAGATTGCAGCAATTTGGTGTTGACCATGAATGAATATGAGAGGGTAACTGATGAGTTTGAGGGTGTAACGGTTTGGTGGGTCTCCAGCAAGGTTGTGTCTCCGGCAAGTTCCATGTCGAACTATCCAGGACAGGAGAAGAGGCTCTATAAGctaaaatttcataagaaaTACAGAGAGGTAGTAACTGGGTCATATTTGGAGCATGTGATCAGAGAGGGGAAGGAGATTCGTATCAGAAATAGGCAGAGGAAGCTATACACAAACGGTACTGGGTATAAGTGGCCCAGTTATAAGCATTCCATGTGGAGCCACATTGTGTTTGAGCACCCAGCCACATTTGACACTTTGGCCATGGAACCAGAGAAGAAGCAAGAGATCATTGAGGATTTGCTCACTTTCAGTAAAAGCAAGGATTTTTATGCAAGAATTGGGAAGGCTTGGAAAAGGGGTTATCTTCTTTACGGCCCTCCTGGTACTGGGAAATCGACGATGATTGCAGCGATGGCCAATTTTTTGGGCTATGATGTCTATGATCTTGAGCTCACGGCAGTGAAAGATAACACAGAGCTGAGGAAGCTGTTGATTGAGACCACGAGTAAGTCTATAATTGTAATTGAAGACATTGATTGCTCACTTGATTTCACagggaaaaggaagaagaaaggagagaaaTTTTCAGATGATGAGAATGAGAAGTTGAACGCAGAAGCTGGAAGGAAAGAAGCAAAGGAAGAAGGTAGCAGCAGCAACAAAGTGACCCTTTCAGGACTGTTGAATTTCATAGATGGGATATGGTCTGCCAGTGGAGGAGAGAGATTGATTATGTTTACTActaactatgtggagaagcttGATCCAGCACTTATCAGAAGGGGTCGAATGGACAAGCACATACAGCTATCTTACTGCAGTTTTGAAGGATTTAAAGTGCTTGCTAAGAATTATTTGAAGCTTGAAACGCATCCACTGTTTCACACAATTCAGACGCTAATCGGGGAGATTAAGATCACCCCAGCTGATGTTGCTGAGAATCTTATGCCCAAGTCGACAGTGGATGATGCAGAAAAATGTCTTTCAAGGTTGATCGAAGCGCTTAAGGAAGcaaaagaagcagaagcagctATTATTGAGGCTGAGAAGCTGAAACAGAGTGCTAGTCCCGTTAAGGAAGACGGTGGATTTTGTGATGGTGACAGAGAAACTGCGGAACCAGAAAACCAATGCCAGCGATA 1520 0.423 MEAIKMAEMWATMGSTLASIMFLWAIIRQYCPVEVRRFFEKYTHRVMGYLYPYIRISFHEFLGERLRRSEAYSAVEAYLSANTSKSAKRLKAEMGKDCSNLVLTMNEYERVTDEFEGVTVWWVSSKVVSPASSMSNYPGQEKRLYKLKFHKKYREVVTGSYLEHVIREGKEIRIRNRQRKLYTNGTGYKWPSYKHSMWSHIVFEHPATFDTLAMEPEKKQEIIEDLLTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANFLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDFTGKRKKKGEKFSDDENEKLNAEAGRKEAKEEGSSSNKVTLSGLLNFIDGIWSASGGERLIMFTTNYVEKLDPALIRRGRMDKHIQLSYCSFEGFKVLAKNYLKLETHPLFHTIQTLIGEIKITPADVAENLMPKSTVDDAEKCLSRLIEALKEAKEAEAAIIEAEKLKQSASPVKEDGGFCDGDRETAEPENQCQR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01280 506 PANTHER ATP BINDING PROTEIN 7 479 - -
Bva06g01280 506 Coils Coil 447 477 - -
Bva06g01280 506 Gene3D - 394 461 - -
Bva06g01280 506 CDD AAA 244 398 - -
Bva06g01280 506 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Bva06g01280 506 PANTHER BCS1 AAA-TYPE ATPASE 7 479 - -
Bva06g01280 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 469 IPR027417 -
Bva06g01280 506 MobiDBLite consensus disorder prediction 479 506 - -
Bva06g01280 506 MobiDBLite consensus disorder prediction 488 506 - -
Bva06g01280 506 ProSitePatterns AAA-protein family signature. 368 387 IPR003960 GO:0005524|GO:0016887
Bva06g01280 506 Pfam ATPase family associated with various cellular activities (AAA) 248 397 IPR003959 GO:0005524|GO:0016887
Bva06g01280 506 Gene3D - 203 393 IPR027417 -
Bva06g01280 506 SMART AAA_5 243 400 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01280 Bva-Chr6 9744051 9746365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01280 208 419 Miscellaneous Gene Families AT5G58870 29.545 1.67e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01280 - - gmx:100798981 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01280 06 9744051 9746365 Bva05g00426 05 2100905 2102658 ECH
Bva06g01280 06 9744051 9746365 Bva06g01280 06 9744051 9746365 ECH