Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00426 ATGGTGGCCATCAACATGACCGAGTTGTGGACAACAATGGGGTCTACCCTTGCTAGCTTCATGTTCTTGTGGGCAATCATTCGCCAGTATTGTCCCTACGAGGTACGCCGTTTCTTCGAGAAGTACACTCACAGGGTTATGAGCTACTTTTACCCCTATATTCGAATCTCCTTCCATGAATTTTTGGGTGATAGACTCAAGCGCAGTGAAGCCTATAGCGCTGTGGAGGCATACCTTAGTGCCAACACGTCAAAGAGCGCTAAACGTCTCAAAGCAGAGATGGGAAAAGATACCAGCAACTTGGTGTTGACTATGGATGAGTATGAGAGAGTCACTGATGAGTTTAAGGGTGTGAAAGTTTGGTGGGTCTCCAGCAAGGTTGTGTTACCGACAAGGTCTATGTCGTACTCCGCAGAACAGGAGAAGAGGTTCTACAAGCTAACGTTTCATAAGAAATACAGAGAGTTAATCACTGGGTCATATTTGGAGCACGTGATCAGAGAGGGGAAGGAGATTCGTATCAGAAATAGGCAGAGGAAGCTATACACAAACAGTCCTGGGTATAAGTGGCCGAGTTTTAAGCAGACCATGTGGAGCCACATTGTGTTTGAGCACCCAGCTACATTTGACACTTTGGCCATGGAACGAGAGAAGAAGCAAGAGATTATTGGAGATTTGCTCACTTTTAGTAAAAGCAAAGATTTTTACGCAAGAATTGGGAAGGCTTGGAAAAGGGGTTATCTTCTTTATGGCCCCCCGGGTACTGGGAAGTCGACGATGATTGCAGCGATGGCGAATTTGTTGGGCTATGATGTTTATGATCTTGAGCTCACGGCAGTGAAAGATAACACGGAGCTGAGGAAGTTGTTGATTGAGACCACGAGTAAATCTATAATTGTAATCGAAGACATTGATTGCTCACTCGATCTCACGGggcaaaggaagaagaaaggagagaaaTGTTCAGATGATGAGAGTGAGAAGCTGAACCCAGAAGCTGGAAGGAAAGAAGCAAATGAAGAAGgtagcagcagcagcaaagTGACCCTTTCAGGACTGTTGAATTTCATAGATGGGATATGGTCTGCTTGTGGAGGAGAGAGATTGATTGTATTTACTACTAACTATGTTGAGAAGCTTGATCCGGCATTAATCAGAAGGGGTCGCATGGACAAGCACATACAGCTATCTTATTGTAGTTTTGAAGGATTTAAAGTTCTTGCTaagaattatttgaatattgaaACTCATCCTCTGTTTTACACAATTCAGAGGCTAATTGAGGAGATTAAGATGACACCAGCTGATGTTGCTGAGAATCTTATGCCCAAATCGCCATTGGATGATGCTGAAAAATGCCTTTCAAGATTGATCGAAGCGCTTGAGGAAACAAAGGAAACAGAAGCAACTATTACAAATGTTGAGACTGAAGAGCTGAAACAGAGTACTATTCCCGTTAAGGAAGACGGGGAGTTTTGTGACCACGACAAAGAAACTGTAGAACCAGAAAACCGGTGCCAGCGATA 1526 0.4214 MVAINMTELWTTMGSTLASFMFLWAIIRQYCPYEVRRFFEKYTHRVMSYFYPYIRISFHEFLGDRLKRSEAYSAVEAYLSANTSKSAKRLKAEMGKDTSNLVLTMDEYERVTDEFKGVKVWWVSSKVVLPTRSMSYSAEQEKRFYKLTFHKKYRELITGSYLEHVIREGKEIRIRNRQRKLYTNSPGYKWPSFKQTMWSHIVFEHPATFDTLAMEREKKQEIIGDLLTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLGYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGEKCSDDESEKLNPEAGRKEANEEGSSSSKVTLSGLLNFIDGIWSACGGERLIVFTTNYVEKLDPALIRRGRMDKHIQLSYCSFEGFKVLAKNYLNIETHPLFYTIQRLIEEIKMTPADVAENLMPKSPLDDAEKCLSRLIEALEETKETEATITNVETEELKQSTIPVKEDGEFCDHDKETVEPENRCQR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00426 508 Coils Coil 447 477 - -
Bva05g00426 508 MobiDBLite consensus disorder prediction 317 343 - -
Bva05g00426 508 CDD AAA 244 398 - -
Bva05g00426 508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 469 IPR027417 -
Bva05g00426 508 Pfam ATPase family associated with various cellular activities (AAA) 248 397 IPR003959 GO:0005524|GO:0016887
Bva05g00426 508 MobiDBLite consensus disorder prediction 317 342 - -
Bva05g00426 508 SMART AAA_5 243 400 IPR003593 -
Bva05g00426 508 MobiDBLite consensus disorder prediction 468 508 - -
Bva05g00426 508 ProSitePatterns AAA-protein family signature. 368 387 IPR003960 GO:0005524|GO:0016887
Bva05g00426 508 PANTHER BCS1 AAA-TYPE ATPASE 7 482 - -
Bva05g00426 508 MobiDBLite consensus disorder prediction 481 508 - -
Bva05g00426 508 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Bva05g00426 508 Gene3D - 203 393 IPR027417 -
Bva05g00426 508 PANTHER ATP BINDING PROTEIN 7 482 - -
Bva05g00426 508 Gene3D - 394 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00426 Bva-Chr5 2100905 2102658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00426 209 438 Miscellaneous Gene Families AT2G29080 28.980 8.93e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00426 - - gmx:100798176 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01280 06 9744051 9746365 Bva05g00426 05 2100905 2102658 ECH
Bva05g00426 05 2100905 2102658 Bva05g00426 05 2100905 2102658 ECH