Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01142 ATGGTCCCAATATCAAGCAAGCAAGCTTTCATGGTCCCTGCTGCATCAGCTGCTAAGGAAAAGCCGCCAAGGCCTGCTGGAACAACATCGGAGAATGCAAGCAAAAAGGTTAGGTTTTGCAACCCAGGCAGTGTCCAAGGTGATTCGATGGAGAGCCTGAAAAAGATGCCAAGCGTGAGAACTACTGGAGATGGCCCCTATGGGAGGAGAATTGAAGGCATTCTGTACAAGTACGTGAAAGATGAAGTGTGGATTGTGTGTGTCTGCCATGGCCGCTTCTTCTCTCCAGCTGGATTCGTGAAGCATGCCGGTGGCAGAGATGTGGAAAACCCTATGAGGCGTATAACTGTCTGCCCTGGCTCTTTCTA 368 0.5027 MVPISSKQAFMVPAASAAKEKPPRPAGTTSENASKKVRFCNPGSVQGDSMESLKKMPSVRTTGDGPYGRRIEGILYKYVKDEVWIVCVCHGRFFSPAGFVKHAGGRDVENPMRRITVCPGSF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01142 122 Pfam Tify domain binding domain 85 117 IPR032308 -
Bva06g01142 122 PANTHER NINJA-FAMILY PROTEIN AFP1 3 119 - -
Bva06g01142 122 MobiDBLite consensus disorder prediction 13 64 - -
Bva06g01142 122 PANTHER AFP HOMOLOG 2 3 119 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01142 Bva-Chr6 9055079 9055447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01142 - - dzi:111290901 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01142 06 9055079 9055447 Bva05g00559 05 2759825 2764094 ECH
Bva06g01142 06 9055079 9055447 Bva06g01142 06 9055079 9055447 ECH