Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00559 ATGATCTTCTCACTCTGGTCAGaATCAGAGGAGTCGTTTTGTTCAAAGATTCAAGCTTTATCTTTGATTCCAATGGAGGAGACAAACCAGAAAATGAATGCCAATCAGAAGAACCTCACCATGCAAGCTAGTGGTGCCCCAATCAATTTTCTGCAGAGATTCTTTGCTGGAAAACCTGACAAGGCCAAATCATCCACCAATTCCGAGGAGGTAGACCTCTCTCTCAACCTTTCTCTGGGTGGGCCTTATGGTCAAAATGGGGGAGAAAAAACTCTGACAAGGTCGTCGTCCATAGCTGGAGACACAACCCAGAGCACCGTTACAAATGGGTCTCTGGGTGGTGGTTACTCTGGTGTTCGGCTGGAGAAGTCTTGCTCTCTCCCAGCAAAAGCTGACATGGTTCTGATGAGGTTTGGGGACTTGCAGACAATGAGAAGAGCTGAGACGGGGCGAAGATTGCTGCTTGAGAAGCAGATGAGGGCCGCAAAAGCAGCCAAAGCAGCTGAGACGGAGAAAGCTCCGGCGGTGCATCCACCACCTGCGGTGGTCGAAGGGCAACACCTGTCACATGGAGCAGCTTCCTGGGCTCCTGCTTCCGCTTATAACATCCCTGGATTGAATGGTGCCATGGACAAAGTAAAGTTTGCTCATCCAAAGCATGAGGAGGAATGGTCTGAAGTGGAAGGATTCCTTATCAAAAGTTTCCAATCTGGCTGCCaaacaaatttgataaataaagGTCTCAGCGGTTTGGCTGAATCAGGAGAGAGTTCCAATGTCCAAACACCAACCAACCAAGTTTTCAAGGTCCCTGCCATATCAGCTGCAAAGGAAAAGCTAGCAAGGCCTGCTGGAACAACCTCTGAGAATGCTAGCAAAAGGGTCAAGTTCTTTCACCCAAGCAGTGCAGCTCAAGGTGATTCATCGGAAAACCTGAGGCAAATGCCGACCGTGTCAACTACTGGAGATGGCCCAAACGGGAAGAGAATTGAAGGTGTTCTGTACAAGTACCTGAAAGGTGATGTGTGGATTGTGTGTGTCTGCCATGGTCACTTCTTCACTCCAGCTGGATTCGTGAAGCATGCTGGTGCCAAAAATGTGGAAAACCCCATGAGGCGTATCTCTGTTCACGTTGGCAATTTCTA 1145 0.483 MIFSLWSESEESFCSKIQALSLIPMEETNQKMNANQKNLTMQASGAPINFLQRFFAGKPDKAKSSTNSEEVDLSLNLSLGGPYGQNGGEKTLTRSSSIAGDTTQSTVTNGSLGGGYSGVRLEKSCSLPAKADMVLMRFGDLQTMRRAETGRRLLLEKQMRAAKAAKAAETEKAPAVHPPPAVVEGQHLSHGAASWAPASAYNIPGLNGAMDKVKFAHPKHEEEWSEVEGFLIKSFQSGCQTNLINKGLSGLAESGESSNVQTPTNQVFKVPAISAAKEKLARPAGTTSENASKRVKFFHPSSAAQGDSSENLRQMPTVSTTGDGPNGKRIEGVLYKYLKGDVWIVCVCHGHFFTPAGFVKHAGAKNVENPMRRISVHVGNF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00559 381 Pfam Ethylene-responsive binding factor-associated repression 68 100 IPR012463 -
Bva05g00559 381 PANTHER NINJA-FAMILY PROTEIN AFP1 46 376 - -
Bva05g00559 381 PANTHER AFP HOMOLOG 2 46 376 IPR031307 GO:0007165
Bva05g00559 381 MobiDBLite consensus disorder prediction 84 106 - -
Bva05g00559 381 MobiDBLite consensus disorder prediction 302 324 - -
Bva05g00559 381 MobiDBLite consensus disorder prediction 279 325 - -
Bva05g00559 381 MobiDBLite consensus disorder prediction 88 106 - -
Bva05g00559 381 Pfam Tify domain binding domain 344 376 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00559 Bva-Chr5 2759825 2764094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00559 - - qlo:115962768 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01142 06 9055079 9055447 Bva05g00559 05 2759825 2764094 ECH
Bva05g00559 05 2759825 2764094 Bva05g00559 05 2759825 2764094 ECH