Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01027 ATGGGCGCGGAGACCTCCTCCATCTCAACCTTTGGATGTGATGGGAACGAAAACTGTACGACCAATGTGATCTTGCACGTGTACGATCTCACCCCTCTCAACAATTACATGTATTGGTTCGGACTTGGAATCTTCCACTCGGGTATTGAAGTATATGGTAAGGAGTACGGGTTTGGGGCGCATGACTTGCCAATTAGTGGAGTTTTTGAGGTGGAGCCAAAGAAATGCCCTGGATATGCATATAGATGTTCTGTCACTCTAGgccaaataaatatgaatccTTCTCAATTTCAAACATTCATTGAGAACCTGGCTTCCGAGTACCATGGGGATACCTATCACCTTATCTCTAAGAACTGCAATCATTTTACAGACGATGTCTGGTATAGATTGACTGGAAAACGGGTGCCGGGTTGGGTGAATCAGCTTGCTAGGCTAGGTGCTCTCTGCAGTTGTCTACTTCCTGAAAGCCTTCAAGTAACTGCTGTTAAACGATTGCCTGAATACCACGAGTGTTCAGAAGACGAAGTAGCTGAATCTCTTTCAACCGCCTCGCCTTCCGAGTTGACTGAAATAGATGATGATCAAGTGAAGCGGCTCCTGACACCATTGGCGGAAAGCCAGAGTGTTTCATTCGTCAGAGAGGCCCAACAAACACAACAATG 665 0.4511 MGAETSSISTFGCDGNENCTTNVILHVYDLTPLNNYMYWFGLGIFHSGIEVYGKEYGFGAHDLPISGVFEVEPKKCPGYAYRCSVTLGQINMNPSQFQTFIENLASEYHGDTYHLISKNCNHFTDDVWYRLTGKRVPGWVNQLARLGALCSCLLPESLQVTAVKRLPEYHECSEDEVAESLSTASPSELTEIDDDQVKRLLTPLAESQSVSFVREAQQTQQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01027 221 PANTHER DESUMOYLATING ISOPEPTIDASE 14 217 IPR008580 GO:0008233
Bva06g01027 221 Gene3D PPPDE domains 16 170 IPR042266 -
Bva06g01027 221 SMART DUF862_2a 21 159 IPR008580 GO:0008233
Bva06g01027 221 Pfam PPPDE putative peptidase domain 22 155 IPR008580 GO:0008233
Bva06g01027 221 ProSiteProfiles PPPDE domain profile. 21 158 IPR008580 GO:0008233
Bva06g01027 221 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 14 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01027 Bva-Chr6 8416734 8418381 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01027 K22763 - gmx:100778961 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00667 05 3332792 3335778 Bva06g01027 06 8416734 8418381 BWGD
Bva06g01027 06 8416734 8418381 Bva06g01027 06 8416734 8418381 ECH