Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00667 ATGGGCACGGAGGCCACCTCCAAGTCGACCTCTGGATGTGatgggaagaaaaaatataagaccCATGTGGTCTTGAATGTGTACGATCTCACCCCTCTCAACAATTATATGTATTGGTTTGGATTGGGAATCTTCCACTCCGGCATTGAAGTACATGGTAAGGAGTACGGGTTTGGAGCCCATGACTTCCCAGCTAGTGGAGTTTTTGAGGTGGAGCCAAAGAAATGCCCTGGATTTGTGTATAGATGTTCTGTTCCTTTGGGCCAAATAAATATGCATCCTTCTGAATTTCGGACATTTATTGAGAACCTGGCTTCTGAGTATCATGGGGATACCTATCACCTTATCTCTAAGAATTGCAATCATTTTACAGACGATGTCTCACGTAGATTGACTGGAAAACGGGTCCCAGGTTGGGTGAATCGGCTTGCTAGGCTAGGTGCCTTATGCAGTTGTCTACTTCCTGAAAGCCTTCAAGTAACTACTGTTAAACAAATGCCTGAATACCACGAGTGTTCGGAAGACGAAGTTGCAGAAACTCTTTCAACCGCCACACCTCGTGAGTCAACAGAGATAGATGATCAAGAGAAACGGCTTCTGGCGGAAAGCGAGGATGTTTCTTTCATCAAAGAGTCCCAAGTAAagcaaaattg 653 0.4319 MGTEATSKSTSGCDGKKKYKTHVVLNVYDLTPLNNYMYWFGLGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPKKCPGFVYRCSVPLGQINMHPSEFRTFIENLASEYHGDTYHLISKNCNHFTDDVSRRLTGKRVPGWVNRLARLGALCSCLLPESLQVTTVKQMPEYHECSEDEVAETLSTATPRESTEIDDQEKRLLAESEDVSFIKESQVKQN 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00667 217 Pfam PPPDE putative peptidase domain 22 155 IPR008580 GO:0008233
Bva05g00667 217 ProSiteProfiles PPPDE domain profile. 21 158 IPR008580 GO:0008233
Bva05g00667 217 MobiDBLite consensus disorder prediction 176 195 - -
Bva05g00667 217 SMART DUF862_2a 21 159 IPR008580 GO:0008233
Bva05g00667 217 Gene3D PPPDE domains 16 184 IPR042266 -
Bva05g00667 217 PANTHER DESUMOYLATING ISOPEPTIDASE 15 215 IPR008580 GO:0008233
Bva05g00667 217 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 15 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00667 Bva-Chr5 3332792 3335778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00667 K22763 - gmx:100778961 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00667 05 3332792 3335778 Bva06g01027 06 8416734 8418381 BWGD
Bva05g00667 05 3332792 3335778 Bva05g00667 05 3332792 3335778 ECH