Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00685 ATGGCCGTTTCCATGAGAGATTTGGATTCAGCTTTCCAAGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGGATTGAGAATTTTAACCCGGTCGCTATTCCTAACTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTGATCTTGAAGACAACTGCTTCAAAAAGTGGTGCCTTGCATCATGATATCCATTACTGGCTTGGTAAAGACGCCAGCCAGGATGAAGCTGGCACTGCAGCCATCAAGACAGTTGAGTTGGATGCAGCTCTTGGAGGACGCGCTGTTCAATATCGTGAAGTACAGGGTCACGAAACTGAAAAGTTCCTATCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGTTGCCTCCGGTTTTAATCACGTTGAGGCTGAAGAGCATAAGACACGGTTGTTTGAGTGCAAAGGGAAACATGTTGTACATGTTAAAGAGGTTCCTTTTGCTCGATCTTCACTCAACCATGATGACATTTTTATTCTGGATACCAGTTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCCAAAGCATTGGAAGTTGTACAGTATATTAAGGATACCTACCATGATGGGAAATGTGAGGTAGCTACTATTGAGGATGGAAAGTTGATGGCTGATTCTGAAAGCGGAGAATTCTGGGGTTTCTTTGGGGGCTTTGCTCCTCTTCCACGGAAGACAGCCGGTGATGACGATAAGCCTGCTGATTCTCATCCTCCAAAGCTACTTAGCGTTGAGAAGGGTCAGGCAGAACCAATTGAGACAGATTCTTTGACAAGAGAGTTACTAGACACAAATAAATGCCATATCCTCGATTGTGGGTTGGAAGTGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGGAAGAAAAAGTGCATGTGGAGCTGCAGATGAGTTACTCAGCAGCTCTGACCGATCAAAATCTAACATAATTCGTGTAATAGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAGACGGCTAATGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTGGCAGCACTCTTAAAACGTCAAGGAGTGAATGTCAAGGGCCTGTTGAAAGCTGATCTGGTAAAAGAAGAACCTCAGCCCTACATTGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTAAGGAGAAGATTCTCCTTGATGCTTCTGATcagtcaaaattttatagcGGGGATTGCTACATCTTTCAGTATTCATATCCTGGAGAAGATAAGGAAGAACACCTTATAGTAACATGGATTGGGAAAAGTAGTGTCGAGgAAGAAAGAGTTTTAGCAATTACACTAGCAAACAAAATGGTTGAGTCACTGAAGTTTCTAGCTTCccagGCTCGAATTTACGAAGGGAatgaatcaattcaattttattctatccTTCAAAGCTTTATTTCTCTCAAGGGTGGACTTAATGATTCATACAAGAATTACATTGCGGAAAAGGAAATTCCAGATGATACATACAATGAGGGTGGTGTTGCACTATTTCGCATCCAAGGCTCTGGACCAGAAAATATGCAAGCAATACAAGTTGAAGCAGTTGCTTCCTCATTGAATTCCTCTTATTGCTACATATTTCATGATGGGGACATTGTCTTTACGTGGTCTGGAAGCTTTGCCACCTCGGATGACCAGGAACTCGTCGAGAGAATGCTGGATTTGATAAAGCCAAATTTGCAAACTAAACCACAAAAGGAAGGAGCGGAATCTGAACAGTTTTGGGATTTGTTAGGAGGGAAATCTGACCATCCTAGTCAAAAGATTGCAAGGGAAGCTGAAAGTGATCCTCACCTATTTTCATGCGACTTCTCGAAAGGATCTGCCGGAGACTTGAAGGTGAAAGAAATATACAACTTCACCCAGGATGATTTAATGACAgaagatattttcatattgGATTGTCATTCGGAAATATTTGTCTGGGTTGGGCAGCAGGTTGAACCCAAGAATAAGATGCACGCTCTAACAATTGGTGAGAAATTTCTTGAGCGTGATTTTCTTATGGAGAGAATATCTGGTGAAGCtccaatttatataattatggaAGGGAGTGAGCCACCTTTCTTTACCCGATTCTTCACATGGGAGTCTGCAAAATCTGCTATGCTGGGCAACTCATTTCAAAGGAAGCTTGCAATTATGAAAAACGGCGGTACTCCAATTGTGGCTAAACCCAAACGAAGAACACCTGTGGCCTATGCTGGAAGGTCCAGTAGTGTGCCAGAGAAATCCCAGCGTTCCCGCAGCATGTCTTTTAGTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCACTTGCAGCCAATTTTGAAAGCCCTAAAGACAGGAACCTCTCAACTCCACCTCCAATGGTTAGAAAGCTGTATCCAAAATCTATGTCTCAAGATTCAGCAAAATTGGCACCCAAATCTGCAGCCATAGCAGCGTTGACTTCTAGTTTTGAACGAGCACGAGAAAGTATTATACCACGATCTATTAAAGAGAGTCAAGAGACAAATGGCAGGGAAAATTATATGAGCAGCAGACTAAAATCCCTTACCATAGAGGAAGATGTGAAAGAGGGTGAAGTTGAAGATGATGACGGTCTCCCAGTATACCCATACGAACGCCTTAACACAAATTCTTCAGGTCCTTTACCGGACATTGATGTGACTAGGCGAGAGGCTTATCTGTCAGCTGCGGAGttcaaagagaaatttgggaTGGCAAAGGAGGCTTTCTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAAATCGCCGTTCAATTATTCTG 2864 0.4166 MAVSMRDLDSAFQGAGQKAGLEIWRIENFNPVAIPNSSYGKFFTGDSYVILKTTASKSGALHHDIHYWLGKDASQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFNHVEAEEHKTRLFECKGKHVVHVKEVPFARSSLNHDDIFILDTSSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVATIEDGKLMADSESGEFWGFFGGFAPLPRKTAGDDDKPADSHPPKLLSVEKGQAEPIETDSLTRELLDTNKCHILDCGLEVFVWMGRNTSLDGRKSACGAADELLSSSDRSKSNIIRVIEGFETVMFKSKFDSWPQTANVTVSEDGRGKVAALLKRQGVNVKGLLKADLVKEEPQPYIDCTGHLQVWRVNGKEKILLDASDQSKFYSGDCYIFQYSYPGEDKEEHLIVTWIGKSSVEEERVLAITLANKMVESLKFLASQARIYEGNESIQFYSILQSFISLKGGLNDSYKNYIAEKEIPDDTYNEGGVALFRIQGSGPENMQAIQVEAVASSLNSSYCYIFHDGDIVFTWSGSFATSDDQELVERMLDLIKPNLQTKPQKEGAESEQFWDLLGGKSDHPSQKIAREAESDPHLFSCDFSKGSAGDLKVKEIYNFTQDDLMTEDIFILDCHSEIFVWVGQQVEPKNKMHALTIGEKFLERDFLMERISGEAPIYIIMEGSEPPFFTRFFTWESAKSAMLGNSFQRKLAIMKNGGTPIVAKPKRRTPVAYAGRSSSVPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFESPKDRNLSTPPPMVRKLYPKSMSQDSAKLAPKSAAIAALTSSFERARESIIPRSIKESQETNGRENYMSSRLKSLTIEEDVKEGEVEDDDGLPVYPYERLNTNSSGPLPDIDVTRREAYLSAAEFKEKFGMAKEAFYKLPKWKQNKLKIAVQLF 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00685 954 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 647 669 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 676 695 IPR007122 GO:0051015
Bva06g00685 954 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Bva06g00685 954 Pfam Villin headpiece domain 919 954 IPR003128 GO:0003779|GO:0007010
Bva06g00685 954 PANTHER VILLIN 1 954 IPR007122 GO:0051015
Bva06g00685 954 SMART VHP_1 919 954 IPR003128 GO:0003779|GO:0007010
Bva06g00685 954 Gene3D Severin 248 356 IPR029006 -
Bva06g00685 954 MobiDBLite consensus disorder prediction 764 778 - -
Bva06g00685 954 Gene3D Severin 380 520 IPR029006 -
Bva06g00685 954 CDD gelsolin_S5_like 518 608 - -
Bva06g00685 954 CDD gelsolin_S3_like 257 343 - -
Bva06g00685 954 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 256 427 IPR036180 -
Bva06g00685 954 Gene3D Severin 521 611 IPR029006 -
Bva06g00685 954 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Bva06g00685 954 SUPERFAMILY VHP, Villin headpiece domain 880 954 IPR036886 GO:0003779|GO:0007010
Bva06g00685 954 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Bva06g00685 954 ProSiteProfiles Headpiece (HP) domain profile. 889 954 IPR003128 GO:0003779|GO:0007010
Bva06g00685 954 PANTHER VILLIN-4 1 954 - -
Bva06g00685 954 Gene3D Villin headpiece domain 892 954 IPR036886 GO:0003779|GO:0007010
Bva06g00685 954 MobiDBLite consensus disorder prediction 241 264 - -
Bva06g00685 954 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Bva06g00685 954 Gene3D Severin 133 247 IPR029006 -
Bva06g00685 954 CDD gelsolin_S6_like 621 721 - -
Bva06g00685 954 CDD gelsolin_S4_like 386 485 - -
Bva06g00685 954 Gene3D Severin 7 132 IPR029006 -
Bva06g00685 954 Pfam Gelsolin repeat 269 337 IPR007123 -
Bva06g00685 954 Pfam Gelsolin repeat 410 479 IPR007123 -
Bva06g00685 954 Pfam Gelsolin repeat 29 111 IPR007123 -
Bva06g00685 954 Pfam Gelsolin repeat 643 715 IPR007123 -
Bva06g00685 954 Pfam Gelsolin repeat 150 217 IPR007123 -
Bva06g00685 954 MobiDBLite consensus disorder prediction 753 783 - -
Bva06g00685 954 CDD gelsolin_S1_like 12 124 - -
Bva06g00685 954 SUPERFAMILY Actin depolymerizing proteins 10 147 - -
Bva06g00685 954 Gene3D Severin 612 737 IPR029006 -
Bva06g00685 954 SUPERFAMILY Actin depolymerizing proteins 595 719 - -
Bva06g00685 954 CDD gelsolin_S2_like 138 217 - -
Bva06g00685 954 SMART VILL_6 137 234 IPR007122 GO:0051015
Bva06g00685 954 SMART VILL_6 392 489 IPR007122 GO:0051015
Bva06g00685 954 SMART VILL_6 519 606 IPR007122 GO:0051015
Bva06g00685 954 SMART VILL_6 19 117 IPR007122 GO:0051015
Bva06g00685 954 SMART VILL_6 622 722 IPR007122 GO:0051015
Bva06g00685 954 SMART VILL_6 254 344 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00685 Bva-Chr6 6620566 6630455 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00685 - - zju:107403659 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00685 06 6620566 6630455 Bva05g00968 05 4917100 4927260 BWGD
Bva06g00685 06 6620566 6630455 Bva06g00685 06 6620566 6630455 ECH