Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00968 ATGGCCGTTTCCATGAGAGATTTGGATCCGGCTTTCCAGGGAGCTGGACAAAAAGCTGGACTTGAAATATGGCGTATTGAGAATTTTAACCCTGTTGCCATTCCTAAGTCGTCTTATGGGAAGTTTTTCACTGGGGACTCTTATGTGATCTTGAAGACGACTGCTTCAAAAAGTGGTGCTTTACGTCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGCACGGCAGCCATCAAGACAGTTGAACTGGATGCAGCTCTTGGAGGACGTGCTGTTCAATATCGTGAAGTACAGGGTCATGAAACTGAAAAGTTCCTATCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGCTGAGGCTGAAGAGCATAAGACCCGGTTGTTTGTGTGCAAAGGGAAACATGTTGTACATGTCAAAGAGGTTCCTTTTGCTCGATCCTCACTCAGCCATGATGACATTTTCATTCTGGATACCAGTTCCAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCAAAAGCATTGGAAGTTGTACAGTACATTAAGGATACCTATCATGATGGGAAATGTGAGGTAGCTGCTATTGAGGATGGAAAGTTGATGGCTGACTCTGAAAGTGGAGAATTCTGGGGTTTCTTTGGGGGCTTCGCTCCTCTTCCAAGGAAAACAGTCAGTGACGATGATAAGCCTGTTGATTCTCATCCTCAAAAGCTATTTGGCGTTGAGAAGGGGCATGCAGAACCTATTGAGACAGATTCTTTGAGAAGAGAGCTACTAGACACAAATAAGTGCTATATCCTCGATTGTGGGTTGGAAGTATTTATCTGGATGGGAAGAAACACCTCACTTGATGAACGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTACTCAGTGGTCCTGACCGATCAAAATTCCACATAATTCGTGTAATAGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAGACAGCTAATGTAACTGTATCTGAAGATGGTCGTGGAAAGGTGGCAGCACTTTTAAAACGTCAAGGAGTGAATGTCAAGGGCCTGTTGAAAGCTGATCCGGTAAAAGAAGAACCTCAACCCTACATTGATTGCACAGGAAATCTACAGGTTTGGCGTGTGAATGGTGAGGAGAAGATTCTTCTTCAAGCTTCTGATcagtcaaaattttatagtgGAGATTGCTACATCTTTCAGTATACATATCCAGGAGAAGATAAGGAAGAGCATCTTATAGTAACATGGATTGGGAAGAGTAGTGTTGAGGAAGAAAGAGCTTCAGCAATTTCACTAGCAAACAAAATGATTGAGTCATTGAAGTTTCTAGCTTCCCAgGCTCGAATTTATGAAGGGAATGAaccaattcaattttattctatccTCCAAAGCTTTATTTCTCTCAAGGGTGGACTTAGTGATTCATATAAGAATTTCATTGcggaaaaagaaattccagATGATACATACAATGAGGGTGGTGTTGCACTATTTCGCATCCAAGGCTCTGGACCAGAGAATATGCAAGCAATACAAGTTCAAACAGTTGCATCCTCCTTGAATTCCTCCTATTGTTACATACTTCATGATGGGGACACTGTCTTTACGTGGTCTGGAAACCTTGCAACCTCAGATGACCAGGAACTAGTCGAGAGAATGCTGGATTTGATAAAGCCGAATTTGCAATCTAAGCCACAAAAGGAAGGATCGGAAACTGAACAGTTTTGGGATTTGTTAGGAGGGAAATCTGAATATTCTAGTCAAAAGATTGTAAGGGATACTGAAGGTGATCCTCACCTATTTTCATGTAACTTCTCGAAAGGAAACTTGAAGGTCACAGAGATATACAACTTCACCCAGGATGATTTGATGACAgaagatattttcatattgGATTGTCACACGGAAATATTTGTGTGGGTTGGGCAACAGATTGACTCCAAGAGTAAAATGCAGGCTTTAACAATTGGCGAGAAATTCCTTGagcatgattttcttttagagaGATTATCTGGGGAAGCtccaatttatattatcatggAAGGGAGCGAGCCACCTTTCTTCACCCGATACTTCTCCACATGGGATTCTGCAAAATCAACTatGCTGGGAAACTCATTTCAAAGGAAGCTTACTATTGTGAAAAATGGGGGTACTCCAATTTTGGATAAACCCAAACGGAGAACACCTGTGTCTTATGGGGGAAGGTCTAGTAGTGTGCCAGAGAAATCCCAGCGTTCCCGCAGCATGTCTTTTAGTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTCAATGCACTAGCAGCCAATTTTGAGAGCCCTAAAGATAGGAACCTCTCAACTCCACCTCCAATGGCTAGAAAGCTATATCCAAAATCTGTGACGCCAGATTCAGTAAAACTGGCACCCAAAGCTGCAGCCATAGCAGCGTTGACTTCTACTTTTGAACAACCCCCTCCTGCGCGAGAAAGTATTATACCTCGATCTATTACTATTAAAGTGAGTCCAGGGACTGCCAAACCCAAGCCTGAGACAAACGACAAGGAAAATTCTGTGAGCAGCAGGTTAGAATCTCTTACCATTGAAGAAGATGTGAAAGAGGGTGAAGCTGAAGATGACGAAGGTCTCCCAATATACCCATATGAACgccttaaaataaattcttcgGATCCTGTACCAGACATTGATGTGACCAAGCGAGAGACATATCTGTCAACTGCCGAGttcaaagagaaatttgggaTGACAAAGGAAGCTTTCTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAAATGGCCATTCAACTATTCTG 2894 0.405 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVAIPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEEHKTRLFVCKGKHVVHVKEVPFARSSLSHDDIFILDTSSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADSESGEFWGFFGGFAPLPRKTVSDDDKPVDSHPQKLFGVEKGHAEPIETDSLRRELLDTNKCYILDCGLEVFIWMGRNTSLDERKSASGAADELLSGPDRSKFHIIRVIEGFETVMFKSKFDSWPQTANVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPYIDCTGNLQVWRVNGEEKILLQASDQSKFYSGDCYIFQYTYPGEDKEEHLIVTWIGKSSVEEERASAISLANKMIESLKFLASQARIYEGNEPIQFYSILQSFISLKGGLSDSYKNFIAEKEIPDDTYNEGGVALFRIQGSGPENMQAIQVQTVASSLNSSYCYILHDGDTVFTWSGNLATSDDQELVERMLDLIKPNLQSKPQKEGSETEQFWDLLGGKSEYSSQKIVRDTEGDPHLFSCNFSKGNLKVTEIYNFTQDDLMTEDIFILDCHTEIFVWVGQQIDSKSKMQALTIGEKFLEHDFLLERLSGEAPIYIIMEGSEPPFFTRYFSTWDSAKSTMLGNSFQRKLTIVKNGGTPILDKPKRRTPVSYGGRSSSVPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFESPKDRNLSTPPPMARKLYPKSVTPDSVKLAPKAAAIAALTSTFEQPPPARESIIPRSITIKVSPGTAKPKPETNDKENSVSSRLESLTIEEDVKEGEAEDDEGLPIYPYERLKINSSDPVPDIDVTKRETYLSTAEFKEKFGMTKEAFYKLPKWKQNKLKMAIQLF 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00968 964 PANTHER VILLIN-3-LIKE 1 964 - -
Bva05g00968 964 Pfam Villin headpiece domain 929 964 IPR003128 GO:0003779|GO:0007010
Bva05g00968 964 Gene3D Severin 518 613 IPR029006 -
Bva05g00968 964 SUPERFAMILY Actin depolymerizing proteins 595 723 - -
Bva05g00968 964 CDD gelsolin_S5_like 518 608 - -
Bva05g00968 964 PANTHER VILLIN 1 964 IPR007122 GO:0051015
Bva05g00968 964 Gene3D Severin 247 356 IPR029006 -
Bva05g00968 964 MobiDBLite consensus disorder prediction 742 781 - -
Bva05g00968 964 CDD gelsolin_S3_like 258 343 - -
Bva05g00968 964 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Bva05g00968 964 SUPERFAMILY Actin depolymerizing proteins 511 611 - -
Bva05g00968 964 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Bva05g00968 964 Gene3D Villin headpiece domain 902 964 IPR036886 GO:0003779|GO:0007010
Bva05g00968 964 Gene3D Severin 388 502 IPR029006 -
Bva05g00968 964 ProSiteProfiles Headpiece (HP) domain profile. 899 964 IPR003128 GO:0003779|GO:0007010
Bva05g00968 964 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Bva05g00968 964 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Bva05g00968 964 SUPERFAMILY Actin depolymerizing proteins 129 244 - -
Bva05g00968 964 SMART VHP_1 929 964 IPR003128 GO:0003779|GO:0007010
Bva05g00968 964 Pfam Gelsolin repeat 29 111 IPR007123 -
Bva05g00968 964 Pfam Gelsolin repeat 150 216 IPR007123 -
Bva05g00968 964 Pfam Gelsolin repeat 638 712 IPR007123 -
Bva05g00968 964 Pfam Gelsolin repeat 410 482 IPR007123 -
Bva05g00968 964 Pfam Gelsolin repeat 271 317 IPR007123 -
Bva05g00968 964 Gene3D Severin 615 735 IPR029006 -
Bva05g00968 964 Gene3D Severin 7 132 IPR029006 -
Bva05g00968 964 CDD gelsolin_S4_like 386 485 - -
Bva05g00968 964 CDD gelsolin_S1_like 12 124 - -
Bva05g00968 964 SUPERFAMILY VHP, Villin headpiece domain 890 964 IPR036886 GO:0003779|GO:0007010
Bva05g00968 964 SMART VILL_6 252 344 IPR007122 GO:0051015
Bva05g00968 964 SMART VILL_6 19 117 IPR007122 GO:0051015
Bva05g00968 964 SMART VILL_6 622 719 IPR007122 GO:0051015
Bva05g00968 964 SMART VILL_6 392 489 IPR007122 GO:0051015
Bva05g00968 964 SMART VILL_6 137 234 IPR007122 GO:0051015
Bva05g00968 964 SMART VILL_6 519 606 IPR007122 GO:0051015
Bva05g00968 964 Gene3D Severin 133 246 IPR029006 -
Bva05g00968 964 MobiDBLite consensus disorder prediction 860 885 - -
Bva05g00968 964 CDD gelsolin_S2_like 138 217 - -
Bva05g00968 964 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 254 427 IPR036180 -
Bva05g00968 964 MobiDBLite consensus disorder prediction 756 776 - -
Bva05g00968 964 CDD gelsolin_S6_like 621 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00968 Bva-Chr5 4917100 4927260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00968 - - gmx:100808499 1665.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00968 05 4917100 4927260 Bva06g00893 06 7733994 7736312 BWGD
Bva06g00685 06 6620566 6630455 Bva05g00968 05 4917100 4927260 BWGD
Bva05g00968 05 4917100 4927260 Bva05g00968 05 4917100 4927260 ECH