Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00662 ATGCCACCAGCTCTGATGGATCCTCCATTGCCAGAACAATCGTCGGTGCCCTCTCCCAGCCCTGAATCTGTTTCTCAAGGATCCGCCATGGAGAATAGGCGTTTCGGAGACCTCAGAGGTTTGCTTTGGCGTATAAATCTGGGGGTTTTGCCATCTTCAGCTTCAGCTTTCATTGATGATCTCCGCAGGGCCGTAGCTGACTCTCGAAGGAGGTATGCTAGTTTGAGGAGGCGTCTCCTAGTTGATCCACATATTCCAAAGGACGGAAGTAATTCTCCCGATGTTACAATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGCCGCTTTTTTCGCAATGCGCAGCTGGAGAGAATGGTTGATCAGGATTTGTCACGTTTATACCCAGAACATGGAAGCTATTTCCAGACTCCTGGATGCCAAGGCATGTTGAGACGAATTTTATTGCTATGGTGTCTTAGGCACCCGGAGTGTGGTTATAGACAAGGGATGCATGAATTACTGGCTCCGCTGTTGTATGTTCTTCAAATTGATTTGGAGCGTCTTTCAGAAGTTCGAAAGCTTTATGAAGATCACTTCATAGACAGGTTTGATGGCCTTTTATGCCAAGAGAATGATCTCTCTTACAGTTTTGACTTTAAAAAATCTCCAGATTTGATGGAGGATGCAATTGGCTCCAATGGAAATGCAATGAAAGTGAAGAGTCTTGATGAGCTTGATCCGGAGATACAGACCATTGTATTGCTAAGTGATGCTTATGGGGCTGAAGGTGAACTGGGTATTGTTTTATCAGAGAAATTCTTGGAACATGATGCATACTGTATGTTTGATGCTTTAATGAATGGGGCCAATGGTTCAGTTGCAATGGCAGATTTCTTCTCATCCTCGCCTGCAGCCGGGTCTCATACTGGCTTACCACCCGTAATTGAAGCTTCTACTGCTTTGTATCATTTGCTGTCTGTTGTGGACTCATCCCTGCACAGCCATCTTGTTGAACTTGAGGTTGAACCCCAGTATTTTGCTCTCCGCTGGTTGCGAGTTTTATTTGGACGGGAGTTCTCACTTGGCCACCTCTTGATCATCTGGGATGATATCTTTGCATCGGATAATAGAAAAGTGGCAAAAAATGCTGATGATGAGACAGACTATGGCTTTAGAATCTTACATTCACCTCGTGGAGCGTTTATATCTGCTTTCGCTGTGGCAATGTTACTTCAATTAAGATCTTCACTGCTTGCGACTGAAAATCCTACAATCTGTCTCCAGAGATTGTTAAACTTCCCCGAGAACGCTAATATTAAGAAACTCCTAGAGAAGGCGAAATCCTTGCAGGCTCTTGCACTAAGTACTGACATATCATCTTCATCACCTTTATTTCTCGGGGTTTATAGCCAAGGTAAATCCATAACAAGATCTGTCACCCTTCCATCTGAATCAGCTTCTCCCAAAACTCCTCTGAGTCTGGTGCCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTCTTCATAATGCTGAGGAGCTTAAGAAGAAAGACGGTGCAGGAAAACAGGTTCCTACTAGAAAAAAGGGATGGACAGAAAAGGTAAAGTTCAGTCTGAAAAGAACAGAATCTGACCCATCTCCGTCAAAGGTTCAGAGTGGCAAAAAGGAATATAAGGCACCTGTTAGACGCAGTTTGCTAGAAGATCTTTCTAGGGAACTTGGCTCAGAGGAAGATATAGGTACAATGCATAGTCATGAAATCTTAGGCCAGCAGGATAACCTTTCTGTAGGTGAAGTGGAGGGACAAGATGGTGGGCGTAAAGAAGACAATTACACTGCTGAGGATAGATGCCTGGGTGGAAATACTGGCAGTGAAGAAAACTCGTCTACTTCTTCTGATCCCAATAGTCCTCCCAACGAGGCTattgataatgaaaatgacTCGGAGAAAAGTAGTGTGGCGTCTAATTTCCTCGATGAATGCGATGAAAATACACCTTCTACTGCCAGTGATTCACCTCTTCCAATTTCTGATCATCCGGGGAACATGACTCTTACATCTGTATGCAATAATGACACCGCAGAAAATTCTCTTACAAGTTCCAAGGACAGAAAGGTTCTTTCTAGCAAGTTCCAGTGGATTTGGAAGCATGGTAAGAATGCTAGTGAGGGTATGCCTGAGAAAGGAGGAGGTGCTTCTGCCGCCACAAATTCTGCCAACAGTTCTAGTAGTCAAAGTAATACAACAGCCTCTAGTACAGCTAATGGGCATTGTAGTTCTGTTAGTTGCAAAGGGGATTCTGTGGACCAGAATATGATGGGCACTTTGAGGAATCTTGGGCATTCTATGCTTGAGCACATTCAGGTAATTGAGTCTGTTTTCCAGCATGACCGGGGACAAGGGGCCTCATTAGAAAACTTCTCTAAAAATGTTCTGGTTGGCAAAGGGCAGGTTACTGCCATGACAGCTCTCAAAGAGCTTCGGAAAATCAGCAATCTTTTGTCTGAGATGTG 2501 0.439 MPPALMDPPLPEQSSVPSPSPESVSQGSAMENRRFGDLRGLLWRINLGVLPSSASAFIDDLRRAVADSRRRYASLRRRLLVDPHIPKDGSNSPDVTMDNPLSQNPDSTWSRFFRNAQLERMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLQIDLERLSEVRKLYEDHFIDRFDGLLCQENDLSYSFDFKKSPDLMEDAIGSNGNAMKVKSLDELDPEIQTIVLLSDAYGAEGELGIVLSEKFLEHDAYCMFDALMNGANGSVAMADFFSSSPAAGSHTGLPPVIEASTALYHLLSVVDSSLHSHLVELEVEPQYFALRWLRVLFGREFSLGHLLIIWDDIFASDNRKVAKNADDETDYGFRILHSPRGAFISAFAVAMLLQLRSSLLATENPTICLQRLLNFPENANIKKLLEKAKSLQALALSTDISSSSPLFLGVYSQGKSITRSVTLPSESASPKTPLSLVPDSYWEEKWRVLHNAEELKKKDGAGKQVPTRKKGWTEKVKFSLKRTESDPSPSKVQSGKKEYKAPVRRSLLEDLSRELGSEEDIGTMHSHEILGQQDNLSVGEVEGQDGGRKEDNYTAEDRCLGGNTGSEENSSTSSDPNSPPNEAIDNENDSEKSSVASNFLDECDENTPSTASDSPLPISDHPGNMTLTSVCNNDTAENSLTSSKDRKVLSSKFQWIWKHGKNASEGMPEKGGGASAATNSANSSSSQSNTTASSTANGHCSSVSCKGDSVDQNMMGTLRNLGHSMLEHIQVIESVFQHDRGQGASLENFSKNVLVGKGQVTAMTALKELRKISNLLSEM 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00662 833 Pfam Rab-GTPase-TBC domain 118 178 IPR000195 -
Bva06g00662 833 Pfam Rab-GTPase-TBC domain 271 371 IPR000195 -
Bva06g00662 833 MobiDBLite consensus disorder prediction 83 103 - -
Bva06g00662 833 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 37 331 IPR035969 -
Bva06g00662 833 MobiDBLite consensus disorder prediction 716 755 - -
Bva06g00662 833 MobiDBLite consensus disorder prediction 1 16 - -
Bva06g00662 833 SMART tbc_4 30 417 IPR000195 -
Bva06g00662 833 MobiDBLite consensus disorder prediction 511 538 - -
Bva06g00662 833 ProSiteProfiles TBC/rab GAP domain profile. 33 371 IPR000195 -
Bva06g00662 833 MobiDBLite consensus disorder prediction 617 685 - -
Bva06g00662 833 MobiDBLite consensus disorder prediction 511 558 - -
Bva06g00662 833 Gene3D - 310 453 - -
Bva06g00662 833 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 102 287 - -
Bva06g00662 833 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 761 - -
Bva06g00662 833 MobiDBLite consensus disorder prediction 729 755 - -
Bva06g00662 833 Coils Coil 58 78 - -
Bva06g00662 833 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 761 - -
Bva06g00662 833 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 307 446 IPR035969 -
Bva06g00662 833 MobiDBLite consensus disorder prediction 581 685 - -
Bva06g00662 833 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00662 Bva-Chr6 6466743 6471703 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00662 K18469 - gmx:100816501 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00987 05 5049714 5054479 Bva06g00662 06 6466743 6471703 BWGD
Bva06g00662 06 6466743 6471703 Bva06g00662 06 6466743 6471703 ECH