Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00645 ATGCGCTCAGGAGCTTGTGCATTGCAGCAGACCCTCACAGCGGAGGCTGCTTCAATCTTGAAGCACTCTCTGGGGTTGGCCAGGAGGAGGGGCCATGCACAGGTCACTCCTCTGCATGTGGCGGCCACTTTGCTGAGCTTAAGAGCTAGTTCCTTGAGAAGGGCTTGTCTCAAATCTCAGCCACACCAAGCTTCACATCCTCTCCAATGCAGAGCTCTTGAGCTTTGCTTCAATGTGGCTCTCAACAGGCTCCCAACAACACCAGGTCCTTTGCTCCACACCCAGCCACAACTTTCAAATGCTCTCATTGCTGCACTCAAAAGAGCGCAGGCTCACCAGAGAAGGGGATGCATAGAGCAACAGCAGCAACAACCACTTCTGACCATAAAGGTAGAACTCGAACAGCTTATCATTTCTATTCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAAGCTGGGTTCTCTAGCACTGCTGTTAAGAACAATATAGAGGACTCTTCAGCTTCTTCTGTTTTCCAGTGTTACAACAGTTCTGGTGgtgttttctcttctccttgtTCACCTTCTCCTTCTGAAAGCCAAAGAGATACCATCAACCCTAGCCATAATTTCAGGCAGACCCATTTCTTGAATTACACTTCTGAGTATAACCCAGTTCTCTTTTCTCCTCAAAAGAGAATACCAGTGCATCCCATCACTGACTCAGCCTCTTCCAAGGAAGATATCAAGTTGGTTTTGGATATCCtagtgaagaaaaagagaaagaacacTGTGATAGTTGGTGACTCACCGTTCCTAACAGAAGGCCTTGTGGGAGAGCTGATAGGAAGGTTAGAGAAAGGAGAGGTTCCTGATGAGCTGAAATCAAcccattttatcaaatttcagTTGGCACCGATTTCTTTTAGGGTCATGAAAAGACAAGAGGTTGAAATGAACCTCTCTGAACTGAAAAGAAAGGTAGATTCTATTGTATCAGGGGGAGTGGGCGTCATTGTTCATATTGGAGACTTAAAATGGACAGTGGAGACAAATTTGAGTGGAAAAGAGGGAGGTTCTCCTGATAGAGAATTAGTCTCTGTTTATAATCCAGTTGATCATCTAGTTGCAGAAGTAGGGAAGTTATTCTCTGACTATGAGAGCACAAATGCTAAGGTATGGTTAATGGCCACGGCAAGTTATCAGACATACATGAGGTGTCAGATGAGGCAACCCTTTCTTGAAACCCAGTGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTTGGTTTGAGTCTCCATGCTTCCAGTGTTTTTGATTCAAAGATGACCATCTCCCAGAACCCAACTCATATGATGGAAACGAAACCCTTCAGTGGCAAGGAGGAAGAGGATAAGCTTACTTGCTGTGAAGAATGTGCCACCAATTATGAAAAAGAAGCTCATTTGTTCAAACCAGGCCAGAAGAAACTGTTGCCTTCCTGGCTTCAGTCTCATAGCACAGAAGCTCACCAAAAGGATGAATTGACCCATTTGAGAAGAAAGTGGAATAGATTATGCCACTGTCTACACCAAAGCAAGCATTCTCAGAACAATTGGAGCAGCAGTTTATACAGCAATAAAAACTATCCTTATAGTTCATCATACCCATGGTGGACAAACCAAGGTAGTATCTTCCCAGATTCAAGTTCCATATCCTTCACCACCGACTCTGCCATGAAACCCATTTTCAGCTCCAATCTGGTACCTCGGTTTCGGCGACAACAATCATGCACCATCGAGTTCAATATCAGCAGTGGAACTCAAAAACAAGAAGCACCAGAACCAAGCTTGGATTCTCTTAAGGGTACGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTGGGAAATTCCCCATTCGGTGATTCAGGGAAAACGGTGGAAAATATAACTGATAGAACACTCCGTCGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAGTCTGAAACAGTTCCTTCAATAGCAGAGGCCTTGGTTGATTCCAAATCCGCAAAGCAAAATATGACTTGGTTAATTATTCAGGGCAATGACTCTATCGGAAAAACAAGGTTGGCTCGCGCAATTGCAGAATCAGTTTTTGGCTCAGCTGATTTGCTCTTTCACTTGGAcatgagaaagaaggaaacttCAGCAGCCCCATTTTCTGAAATGCTGGCGAGAGCATTGAAAACCAGTGAAAAGCTTGTGATTTTGATAGAGAATGTTGATTTTGGAGATACCCAGTTCAAGAAATTCCTCGCTGATGGATTTGAAACAGGAAAGTTTGGAGGTTTATGTAGGAGAGAGGAAAATTCAGGACAAGCAATCTTTATATTGACTAACAGTGGCTTCACAAGCAATGAAGAACAGAATCAGGACTCTCTGATCAAAATTGTGTTGCAGGTCAGTAAAACTAAGCCTAACTCGGATGCACCTTATTTGGAGCACAAGCGCAAGGCCGAATGGGATTTGTTCACCAAGACCAAGAGCCCCAGAATTGATGAAAAGGAAGAGGAGCTGGTGGGTTCTGAACAAGGGAACGAAAAGGGAGAGTTTTCAAGGCAGTCAAGCTTTAACACCCTTGATCTGAATATCAGAgctgatgaagaagatgacgGGGAAGAAAAAACAGGGGAAAGTAGTCCTATTTCTAGTGATTTGACAAGAGAAACCATAGTTGACCTCACGAACCCAAATGGATTTCTCGACTCAATTGAGAATCGCTTTGAATTCAATCGTAGTCCAGCTAGGGACAGAGAAATAACAGAGTTGTTTTTGTCCAAGATCAAAGGGTCTTTTGAGGAGGTTTGTGGGCAgcaaaatttggaaaattttagTGTTGAAGAGAGGGTGCTAGAGGTAGTAAAAATTGGGTCTGGTTCTTTTACTAACAGCTTGTTTGAGAAATGGctgaaagaaatttttcaaaCCAGCTTAAAAGCAGTTAACTTTGGCGGGAAGGAGGGTATAGTTTTTAAACTTTGTTGGGGTGGTAAAGGAGATCATAGGATTTTGGATACTGGGTTCATGAGTTCATCTCTGCCCAACAACATCCAAGTTAATTACTTGATGAATTA 3092 0.4179 MRSGACALQQTLTAEAASILKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQPHQASHPLQCRALELCFNVALNRLPTTPGPLLHTQPQLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSASSVFQCYNSSGGVFSSPCSPSPSESQRDTINPSHNFRQTHFLNYTSEYNPVLFSPQKRIPVHPITDSASSKEDIKLVLDILVKKKRKNTVIVGDSPFLTEGLVGELIGRLEKGEVPDELKSTHFIKFQLAPISFRVMKRQEVEMNLSELKRKVDSIVSGGVGVIVHIGDLKWTVETNLSGKEGGSPDRELVSVYNPVDHLVAEVGKLFSDYESTNAKVWLMATASYQTYMRCQMRQPFLETQWALQAVPVPSGGLGLSLHASSVFDSKMTISQNPTHMMETKPFSGKEEEDKLTCCEECATNYEKEAHLFKPGQKKLLPSWLQSHSTEAHQKDELTHLRRKWNRLCHCLHQSKHSQNNWSSSLYSNKNYPYSSSYPWWTNQGSIFPDSSSISFTTDSAMKPIFSSNLVPRFRRQQSCTIEFNISSGTQKQEAPEPSLDSLKGTEGKEVKITLALGNSPFGDSGKTVENITDRTLRRAHICKLLQENVPWQSETVPSIAEALVDSKSAKQNMTWLIIQGNDSIGKTRLARAIAESVFGSADLLFHLDMRKKETSAAPFSEMLARALKTSEKLVILIENVDFGDTQFKKFLADGFETGKFGGLCRREENSGQAIFILTNSGFTSNEEQNQDSLIKIVLQVSKTKPNSDAPYLEHKRKAEWDLFTKTKSPRIDEKEEELVGSEQGNEKGEFSRQSSFNTLDLNIRADEEDDGEEKTGESSPISSDLTRETIVDLTNPNGFLDSIENRFEFNRSPARDREITELFLSKIKGSFEEVCGQQNLENFSVEERVLEVVKIGSGSFTNSLFEKWLKEIFQTSLKAVNFGGKEGIVFKLCWGGKGDHRILDTGFMSSSLPNNIQVNYLMN 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00645 1030 PANTHER PROTEIN SMAX1-LIKE 5 1 1004 - -
Bva06g00645 1030 Gene3D - 9 170 IPR036628 -
Bva06g00645 1030 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Bva06g00645 1030 ProSiteProfiles Clp repeat (R) domain profile. 8 171 IPR004176 -
Bva06g00645 1030 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1004 - -
Bva06g00645 1030 Pfam Clp amino terminal domain, pathogenicity island component 131 167 IPR004176 -
Bva06g00645 1030 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Bva06g00645 1030 MobiDBLite consensus disorder prediction 853 868 - -
Bva06g00645 1030 Gene3D - 631 841 IPR027417 -
Bva06g00645 1030 MobiDBLite consensus disorder prediction 838 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00645 Bva-Chr6 6367054 6370862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00645 - - jre:108979658 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01002 05 5127273 5131080 Bva06g00645 06 6367054 6370862 BWGD
Bva06g00645 06 6367054 6370862 Bva06g00645 06 6367054 6370862 ECH