Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00598 ATGGCACCAAAGTTTACTTTTGAACCTTCAGAAATTTTCATTCTGATTCTGCTATGGCTGGCCAGCACAGCAGCACAATGGTCACCCCTGCAGGCACCCAAAGAGCTAGCTCAGAACCTTGTTCGTGATCCCGTGTTGCTCTCAGAAGCTTCTACAGATTACGGGCACATAGTTCACGAAAACCCAGTGGCAGTTTTCAAGCCAAGCTCCGTCAGTGACATCGCGGGGTTGATCAAGTTCTCGAACTCTCTTCCGATTCCTTTCACTGTGGCTGCGAGAGGGCAAGCCCACTCGGTTCACGGGCAAGCCATGGCACGCGATGGGGTTGCAGTGAATATGACTGAGCTCAATGATTATAGAAAGGGGTCTGGGATTGTGGTGAAGGTGTCTGGGAAATATGCAGATGTGGGTGGGGAGCAGATTTGGATTGATGTCTTGCATGCAACACTTGAATATGGACTTACGCCTCTCTCGTGGACTGATTATTTGTATCTGACGCTTGGCGGTACTCTCTCTAATGCTGGGATTAGTGGCCAAGCCTTCCAATTTGGACCTCAAATCTCCAATGTTCATGAATTGGAACTTGTCACAGGGAAAGGAGACATAGTGACCTGTTCAGCCACGAAAAACTCCAACCTATTTTACGCAGTTCTTGGAGGTTTAGGTCAATTTGGGATTATAACTAGAGCAAGAGTAGCTCTGGGGCCTGCACCCACTAGGgTTAAGTGGCTTCATTTGCTTTACAATGACTTCTCTGCATTTTCTGGAGACCAAGAACATTTGATCTCACTCGCGGAAAATGCACCGGATTACGTAGAAGGTTTTCTTCTGCTAAATCAGCCACCATTGGACCTCTCCTTTTATCCAGCAGCTGTTCAGCCCAGAATAACTTCTTTAGTAACCCAGTACAGCATCATCTACATTATAGAGCTGGTCAAATATTACGATGATCAATCTCAAGAAAACGTGGACCAGGAAGTTGAAGATTTGGTGAGAGGATTAAAGTTTGTCCCTAGGTTTATGTTCGAAAAAGATGCATCCTACGAGGAGTTCTTGAATAGAGTTCATAGTGATGAGCTTGTTCTCAGGTCACAAGGACTTTGGGATCTCCCTCATCCTTGGTTGAACATCTTTGTTCCCAAGTCTCGAATCTCGGATATTGATGAAGGTGTGTTTAAGGGCATTATCCTTAAACAAAATCTTACTGCAGGACTTGTGCTAATTTACCCCATGAACCGTAGCAAGTGGGATGATAGGATGTCTGCAGTTACACCAGATGAAGATGTTTTCTACAATGTGGCTTTTCTGCATACAAGTGGGTTTGATCAGTTGAAGGCATTTCAAGCTCAAAACCAAGAGGTGCTGCAGTTCTGTGAGGATGCTGGTATTAAATATAAGCAATATCTTCCCCAAGATAAAACAAAGCAAGAGTGGAAGGAATATTTTGGTCCCAAATGGAAAActtttcaagaaagaaaagctgAATTTGATCCCAAACATATATTGGCACCTGGACAAGGAATTTTTACATG 1532 0.4367 MAPKFTFEPSEIFILILLWLASTAAQWSPLQAPKELAQNLVRDPVLLSEASTDYGHIVHENPVAVFKPSSVSDIAGLIKFSNSLPIPFTVAARGQAHSVHGQAMARDGVAVNMTELNDYRKGSGIVVKVSGKYADVGGEQIWIDVLHATLEYGLTPLSWTDYLYLTLGGTLSNAGISGQAFQFGPQISNVHELELVTGKGDIVTCSATKNSNLFYAVLGGLGQFGIITRARVALGPAPTRVKWLHLLYNDFSAFSGDQEHLISLAENAPDYVEGFLLLNQPPLDLSFYPAAVQPRITSLVTQYSIIYIIELVKYYDDQSQENVDQEVEDLVRGLKFVPRFMFEKDASYEEFLNRVHSDELVLRSQGLWDLPHPWLNIFVPKSRISDIDEGVFKGIILKQNLTAGLVLIYPMNRSKWDDRMSAVTPDEDVFYNVAFLHTSGFDQLKAFQAQNQEVLQFCEDAGIKYKQYLPQDKTKQEWKEYFGPKWKTFQERKAEFDPKHILAPGQGIFT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00598 510 Gene3D - 240 468 IPR016170 -
Bva06g00598 510 SUPERFAMILY FAD-binding/transporter-associated domain-like 38 236 IPR036318 GO:0050660
Bva06g00598 510 Pfam FAD binding domain 63 206 IPR006094 GO:0050660
Bva06g00598 510 SUPERFAMILY FAD-linked oxidases, C-terminal domain 238 510 IPR016164 GO:0003824|GO:0050660
Bva06g00598 510 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 10 509 - -
Bva06g00598 510 ProSiteProfiles PCMH-type FAD-binding domain profile. 58 237 IPR016166 GO:0071949
Bva06g00598 510 PANTHER GULONOLACTONE OXIDASE 10 509 - -
Bva06g00598 510 Gene3D - 47 509 IPR016167 -
Bva06g00598 510 Gene3D - 113 239 IPR016169 -
Bva06g00598 510 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 238 509 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00598 Bva-Chr6 6136704 6139703 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00598 K00279 - gmx:100816815 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01043 05 5361644 5365107 Bva06g00598 06 6136704 6139703 BWGD
Bva06g00598 06 6136704 6139703 Bva06g00598 06 6136704 6139703 ECH