Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01043 ATGGCACTCTCAGATGGCCAGCTACCATGGCAATGGCCTAAAGAGCTCGAGGGAAAGCTTCGCCATGATCCTGAGACCCTATCACTAGCCTCCACTGATTATGGCAACATAGTTCATGAAAAACCTTTAGCAGTTTTCTACCCATCCTCCATTGCTGATATCTCACTTCTGATAAAATTCTCAAACTCTCTTCCCACCCCTTTCACCATAGCTGCAAGAGGGCAAGCCCACTCGGTTGACGGTCAAGCCATGGCACTTAATGGGGTTGTGGTGAACATGACGGAGCTAAATAATTACAGAAATGGGTCTGGGATTGTGGTGTCTGAGAAGGAGAATTATGCAGATGTGGGTGGGGAGCAGATTTGGATTGATTTGCTGCATGCAGCCCTACAGCATGGACTTACACCTCTCTCGTGGACTGATTATTTGTATTTGACGGTTGGTGGTACCCTCTCTAATGCTGGGATTAGTGGCCAAACTTTCCTGTTTGGACCTCAAATCTCCAATGTTCATGAATTGGATGTTATTACTGGGAAGGGAGACCTAGTGACATGCTCAGCAGGGAACAATTCGGAGCTATTCAACGCAGTTCTTGGAGGTTTAGGTCAATTTGGGATCATAACCAGAGCAAGAATAGCCCTAGGCCCTGCACCCACCAGGGCAAATATGAATTGGTTGCAGGCGAAGTGGCTCCGTTTGGTTTACCGTGACTTCTCTGCATTTTCTGGAGACCAAGAACAATTGATTTCACTCAATGGAAAATCGCCAGATTACCTAGAAGGCCATCTTCTACTAAATAAGCCACCATTGGACCTTTCCTTTTATCCACCGCCTGATCACCCAAGGATTTCTTCCCTCCTAACCCAAGATGGCATTCTCTACATCCTAGAGCTAGCTAAATATTATGATAATCATTCTCACACAATCGTGGACAagGAAGTTGAAGAGTTACTGAGTGGGCTGAAGTTTGTTCCTACATTCAAGTTCGAAAGGGATGTATCCTATGAAGATTTCCTGAATAGAGTTCCCAATGAAGAGCGTGCGCTTCGGTCCCAGGCACGTTGGGATCTCCCTCATCCTTGGTTAAGCATGTTTGTTCCCAAATCTCGAATCTCAGACTTTGATCAAGGTGTGCTCAAGGACATTCTTCTCAAGCAAAATTTAACAGCACAAGGACTTGAGCTCATTTTCCCCATCAACCGAAACAAGTGGGATGATAGAATGTCTGCAGTTACCCCGGATGAGGACGTTTTCTACGCTGCGAGTCTTCTGCAATCAAGTGTGATTGATCATTTGGAAGATTTAGAGAATCAAAATAATCAGATATTACAGTTCTGTAAGGATTCTGGTATCCAGGTGAAGCTATATCTTCACAAATACAAGTCCCAGGAAGAGTGGATGGAACACTTCGGCCCCAAatggaaaaaatttcaacagatGAAAGCTGAATTTGATCCCAGAAAGTTATTGTCACCCGGACAAGAGATTTTCACCAATTG 1499 0.4423 MALSDGQLPWQWPKELEGKLRHDPETLSLASTDYGNIVHEKPLAVFYPSSIADISLLIKFSNSLPTPFTIAARGQAHSVDGQAMALNGVVVNMTELNNYRNGSGIVVSEKENYADVGGEQIWIDLLHAALQHGLTPLSWTDYLYLTVGGTLSNAGISGQTFLFGPQISNVHELDVITGKGDLVTCSAGNNSELFNAVLGGLGQFGIITRARIALGPAPTRANMNWLQAKWLRLVYRDFSAFSGDQEQLISLNGKSPDYLEGHLLLNKPPLDLSFYPPPDHPRISSLLTQDGILYILELAKYYDNHSHTIVDKEVEELLSGLKFVPTFKFERDVSYEDFLNRVPNEERALRSQARWDLPHPWLSMFVPKSRISDFDQGVLKDILLKQNLTAQGLELIFPINRNKWDDRMSAVTPDEDVFYAASLLQSSVIDHLEDLENQNNQILQFCKDSGIQVKLYLHKYKSQEEWMEHFGPKWKKFQQMKAEFDPRKLLSPGQEIFTN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01043 499 ProSiteProfiles PCMH-type FAD-binding domain profile. 38 217 IPR016166 GO:0071949
Bva05g01043 499 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 14 497 - -
Bva05g01043 499 PANTHER GULONOLACTONE OXIDASE 14 497 - -
Bva05g01043 499 Gene3D - 220 456 IPR016170 -
Bva05g01043 499 Pfam FAD binding domain 42 186 IPR006094 GO:0050660
Bva05g01043 499 Gene3D - 23 497 IPR016167 -
Bva05g01043 499 SUPERFAMILY FAD-linked oxidases, C-terminal domain 228 498 IPR016164 GO:0003824|GO:0050660
Bva05g01043 499 Gene3D - 93 219 IPR016169 -
Bva05g01043 499 SUPERFAMILY FAD-binding/transporter-associated domain-like 17 216 IPR036318 GO:0050660
Bva05g01043 499 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 227 497 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01043 Bva-Chr5 5361644 5365107 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01043 K00279 - gmx:100816815 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01043 05 5361644 5365107 Bva06g00598 06 6136704 6139703 BWGD