Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00592 ATGTCGAGGCTGTTTCGGAACACTTCGCTCCTGAAGCGCTTTCTATTCGACTCTGAGGGCTTTAAACGAGGAATATTGGGCACATCTCAAATTTGCAGCTTTTCATCTAGAGGTAAAAGGGGTTCTAAATCAGATGGAAGTGATTCAAATGAAGAGAACATGTCAAAGAAAGATTTGGCTCTACAACAAGCTCTAGATCAGATCACATCTTCATTTGGAAAGGGATCTATCATGTGGCTTGGTCGCTCTGTTGCACCCAAACAAGTACCTGTGTTGTCAAGTGGTTCTTTTGCTCTTGATATAGCACTCGGTGTTGGTGGATTTCCAAAGGGACGTGTCGTGGAAATATATGGTCCTGAGGCTTCTGGGAAAACGACCCTTGCTTTACATGTCATTGCAGAAGCACAAAAGCAAGGAGGCTATTGTGTTTTTATTGATGCTGAGCATGCACTTGATCAAGCCCTTGCAGAGTCTATTGGTGTGAATACTCAGAACTTACTTCTCTCACAACCTGATTGTGGTGAACAGGCACTTAGTCTTGTGGATACCTTAATCCGGAGTGGTTCAGTTGATGTGATTGTTGTTGACAGCGTAGCTGCCCTTGTTCCTAAAGGTGAACTTGATGGTGAGATGGGAGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCACTTCGAAAATTGAGCCACTCTTTATCAATGTCACAgtgtattttgatttttataaatcaGGTGAGGTCAAAGCTTTCTACTTTTGGGGGATTTGGTGGGCCAACTGAAGTTACTTGTGGTGGTAATGCTTTGAAATTCTATGCTTCAGTGCGGCTAAACATCAAACGAGTAGGGTTTATCAAGAAGGGTGAAGAGACTCTAGGAAGCCAGGTTCTTGTTAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTCAAAACTGCACAATTTGAGCTTGAGTTTGGCAAGGGTATAAGTAGAGAAGCTGAGATTATAGAGTTGGCCCTAAAACACAAACTCATCTCAAAGGCTGGTGCATTTTTTCGCTGTAACAATCAGACTTTCCACGGTAAGGATGCTTTTAAGAGGTTCCTGGCTGAGAATCCTAACGTGCTAGAACAACTTACTGCCAAACTCAGGGAGAAGCGTCTTTATGCTCAGCCAGAAACAGAGGCGACAGATGGAGATCTTATAGAAGAAATTGTGCCACCTGAATCTACTGATGAAGAAGCTACTGCTGCAGAAGCATG 1244 0.4325 MSRLFRNTSLLKRFLFDSEGFKRGILGTSQICSFSSRGKRGSKSDGSDSNEENMSKKDLALQQALDQITSSFGKGSIMWLGRSVAPKQVPVLSSGSFALDIALGVGGFPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFIDAEHALDQALAESIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSMSQCILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRVGFIKKGEETLGSQVLVKVVKNKLAPPFKTAQFELEFGKGISREAEIIELALKHKLISKAGAFFRCNNQTFHGKDAFKRFLAENPNVLEQLTAKLREKRLYAQPETEATDGDLIEEIVPPESTDEEATAAEA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00592 414 MobiDBLite consensus disorder prediction 41 55 - -
Bva06g00592 414 CDD recA 56 380 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 SUPERFAMILY RecA protein, C-terminal domain 324 380 IPR023400 -
Bva06g00592 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 323 IPR027417 -
Bva06g00592 414 MobiDBLite consensus disorder prediction 384 414 - -
Bva06g00592 414 Pfam recA bacterial DNA recombination protein 60 324 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 Hamap Protein RecA [recA]. 57 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 MobiDBLite consensus disorder prediction 391 414 - -
Bva06g00592 414 SMART AAA_5 110 284 IPR003593 -
Bva06g00592 414 MobiDBLite consensus disorder prediction 34 55 - -
Bva06g00592 414 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 403 - -
Bva06g00592 414 PANTHER RECA 1 403 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 ProSiteProfiles RecA family profile 1. 88 247 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Bva06g00592 414 Gene3D - 87 385 IPR027417 -
Bva06g00592 414 ProSiteProfiles RecA family profile 2. 257 328 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Bva06g00592 414 ProSitePatterns recA signature. 269 277 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Bva06g00592 414 PRINTS RecA protein signature 352 369 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 PRINTS RecA protein signature 146 175 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 PRINTS RecA protein signature 218 247 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 PRINTS RecA protein signature 299 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 PRINTS RecA protein signature 180 209 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 PRINTS RecA protein signature 266 294 IPR013765 GO:0003697|GO:0005524|GO:0006281
Bva06g00592 414 TIGRFAM tigrfam_recA: protein RecA 57 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00592 Bva-Chr6 6093511 6099176 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00592 K03553 - tcc:18588379 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01048 05 5396983 5397351 Bva06g00592 06 6093511 6099176 BWGD
Bva06g00592 06 6093511 6099176 Bva06g00592 06 6093511 6099176 ECH