Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00473 ATGGCATCGCCAGAGAATGAGCCTTCTCACTCTCCTTTTGCCTCTGACGAACCTCGTCTTCCTGCCCACGCATGTATGCAGAAATTTAGGCTCTATGAGACTCGATCGAAATTTTACATGATAGGAAGGGACAAAAGTCGGACATACTGGAGAGTACTAAAGATTGACCGTTTAGATCCTTCCGAGTTAAACATACGTGAAGATTCTACCACATATACAGAGAGTGAATGTTCTGAACTGTTGAGGCGGATACACGAAGGGAACAAGTCCACAGGTGGACTAAGATTTGTTACAACATGTTATGGAATTGTTGGATTCATCAAATTTCTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAGATTGGAGCAATCTGTGGTCATACAGTGTATGCAATCTCAAAGAGCGAGATAATTCCATTACCAAATTCTTCAGTTCAGTCTGACATTGCTGATTCTAGAAATGAAAACAGATACAAGAAGCTCCTATGCATGGTCGACCTGACAAAGGACTTCTTTTTTAGCTACTCATACCAAATTATGCGTAGTCTTCAAAAGAACTTGTATGGTAATGAGGTTGGACAGGTCCTCTATGAGACTATGTTTGTTTGGAATGAGTTCCTAACTCGGGGAATTAGGAATCACCTCCAAAATACTATTTGGACAGTTGCTTTAGTATATGGCTTTTTTAAACAGGACACACTTGTGATATCTGGACAAGAGTTCATACTTACCCTCATTGCAAGACGTTCACGACACTATGCTGGCACTAGGTATTTGAGACGAGGTGTTAATGAGAAGGGGAGAGTAGCTAACGATGTTGAGGCAGAACAAATTGTGTTTCAGGATGTTCAGGAAGGCTTTCCTGTCCAAATAAGTTCTGTTGTCCAGAATCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACCTCACGTCTAAATATTAAACCAGACATTATACTGTCAAGGAAGGATCAGAATTATCAAGCCACGAgacttcattttgaaaatcttgTCAAAAGATATGGGAATCccatcataattttaaatttaataaagACCCATGAGAAGAAGCCTCGTGAGTCCATACTCCGTTCAGAGTTTGCAAATGCAATTGATTTCATCAATAAAGATTTATCCGAGGAAAACCGTCTTAGATTCCTTCACTGGGATCTGCACAAACATTTTCGAAGCAAGTCTGCAAATGTCTTGATACTTCTAGGCAAGGTGGCTGCATATGCATTGACATTAACAGGTTTTTCCTACTGCCAAGTGGCACCTACCTTGAGACCAGAGGACTGCTTGAGATGTCCGTCTATGGACAATGCTGATAACAGAGGTGGTTCATCTTCAAGACATTTTGTGGATGATAATGAGGATGGTGATAATTTAGATACAAAACCTAGTTGGGGACACAACGTTGCCAATGGAAATCATTCTATCAAGCCACCCATATTCCAGAGAGGGGTGCTCCGGACAAATTGCATAGACTGCCTAGATCGTACAAATGTCGCACAATATGCATATGGATTGGCTGCTCTTGGCCAACAGCTTCATGTTTTGGGAGTTATTGATCAAGCGAAAGTTGACCTTGATGATCCTGTAGCGGACAATTTGATGGGGTTTTATGAAAGGATGGGCGACACACTTGCACATCAATATGGTGGTTCTGCTGCTCACAACAAGATATTCTCTGAGAGGAGGGGTCAGTGGAGAGCTGCTACCCAATCTCAGGAGTTCTTTAGGACTCTTCAACGCTATTATAGTAATGCATATATGGATGCTCAGAAACAAGACGCAATCAATGTATTCCTGGGGAACTTTCAGCCACAGCAGGGCGAGCCTGCACTATGGGAGTTGGGTCCAGATCAGAACTGTGATGTGGGAAGCAATGTAGATGAATATGGAAGTGAAACTCTGGGTTTCAAGAGATCCTTCTCAGATGGGAACATTCTTCGCAGAAGCCATACATCTATGTCAGCCGGGAATGCCAAGAAGGAAAAGCTCACTGATTCATGTTTGCCGGACCTGTCAGAAGAAGGAACCAAGCTTTTATCAGAGTCATCACCTGATATTTCTACTTCTGAGAACGGTATAGCATATTCAAGATATACTCCCTCAATGCCTCGGAGACACCTTTTTGGAGACATGCAGAAAGAGCGATCCCTTGATAATCAAATTTACTATTCTGAACATGGGAATTCATTCAGCTGCTCCAACTTCCTTGACTTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGGCATATGAAAGGTCATCATCAATTACCACAATGTCCCCAGTTGCTGGGCTTTCATCCGAAAATGTTGTTAATGGAGTTTTGGGAGAAACAACTCCCTCCTCCAGTGGATGTGGTTCCAGCACCAAGGGAAAGGAACGAACTGGATTAGACTTATCCTATAGTAATGACCACTCCAATGTTCCAGAGGAATTTCCAGATAGTTTTGTAGAATGGGTGACTTCGGGACAGACACTCTGCCATTG 2519 0.4192 MASPENEPSHSPFASDEPRLPAHACMQKFRLYETRSKFYMIGRDKSRTYWRVLKIDRLDPSELNIREDSTTYTESECSELLRRIHEGNKSTGGLRFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAISKSEIIPLPNSSVQSDIADSRNENRYKKLLCMVDLTKDFFFSYSYQIMRSLQKNLYGNEVGQVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTLVISGQEFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVEAEQIVFQDVQEGFPVQISSVVQNRGSIPLFWSQETSRLNIKPDIILSRKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRSEFANAIDFINKDLSEENRLRFLHWDLHKHFRSKSANVLILLGKVAAYALTLTGFSYCQVAPTLRPEDCLRCPSMDNADNRGGSSSRHFVDDNEDGDNLDTKPSWGHNVANGNHSIKPPIFQRGVLRTNCIDCLDRTNVAQYAYGLAALGQQLHVLGVIDQAKVDLDDPVADNLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAQKQDAINVFLGNFQPQQGEPALWELGPDQNCDVGSNVDEYGSETLGFKRSFSDGNILRRSHTSMSAGNAKKEKLTDSCLPDLSEEGTKLLSESSPDISTSENGIAYSRYTPSMPRRHLFGDMQKERSLDNQIYYSEHGNSFSCSNFLDLDWLSSSGNSCEEEAYERSSSITTMSPVAGLSSENVVNGVLGETTPSSSGCGSSTKGKERTGLDLSYSNDHSNVPEEFPDSFVEWVTSGQTLCH 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00473 839 MobiDBLite consensus disorder prediction 452 468 - -
Bva06g00473 839 MobiDBLite consensus disorder prediction 785 808 - -
Bva06g00473 839 Pfam SacI homology domain 101 398 IPR002013 GO:0016791
Bva06g00473 839 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 16 839 - -
Bva06g00473 839 ProSiteProfiles Sac phosphatase domain profile. 165 558 IPR002013 GO:0016791
Bva06g00473 839 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 16 839 IPR043573 GO:0043813|GO:0046856
Bva06g00473 839 MobiDBLite consensus disorder prediction 444 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00473 Bva-Chr6 5426261 5436676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00473 24 839 Acyl Lipid Metabolism Gene Families AT5G20840 62.439 0.0 1008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00473 K22913 - gmx:100810079 1336.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01161 05 6001311 6012414 Bva06g00473 06 5426261 5436676 BWGD
Bva06g00473 06 5426261 5436676 Bva06g02294 06 14882333 14896076 ECH
Bva06g00473 06 5426261 5436676 Bva06g00473 06 5426261 5436676 ECH