Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00459 ATGGCTTCTTTGGTCGGTTGTGATCCCTGCTCCTGCAACAGCAAAGCTTTTTCTCAGTACCCATCTCTTTCGTCTGAGCGTAGTGGCAGTGGCTGCTGCCTTCCATTCCCATTTCTTCGAAAGTTAGTCTATGATAATGTATCTCGGGTTGATAAAACCACTGGCTTTACTCTTCGAAGTTGCTTTAACATCAATGGTCATGGTAATAACCTTAATTTCAAGACGAAGGGCCGTGCTTTTGGATCTCTTCCTCGTCCGCCGTTGTTAGCTGATTTAGAGGATACTACTGCCAAGGATGATGGCCGTGATGCTGTTctctttaaaattgataatagatCCCTAAATAGGAGTCCCGCTAAACCGCTTAGTATCCCCAATCACAATTTGTCCCAGAAAATAGTTGTTGCTGTTGACGTTGATGAggTATTAGGAAACTTTGTGTCAGCATTGAACAGATTCATCGCAGATCAATATTTGTCAAATTATTCAGTTTCGCAGTACCATGTATATGAGTTCCGCAAGATATGGAACTGTTCACGTGAGGAAGCTAATCACCGTGTTCATGAGTTTTTTAAGACGCCATATTTCAAGTCAGGGATCCACCCTGTACCAGGCGCTCAGACGGCCCTTCAGAAGTTATCGAGATTTTGTAGCCTATCAGTTGTAACATCTCGGCAGAATGCAATCAAGGATCACACAATTGAGTGGATAGAGGAGAATTATCCAGGACTATTTCAGGAGATTCACTTTGGTAATCACTTTGCTCTTAATGGGGTATCTAGACCAAAATCAGAGATTTGCAGGTCTTTAGGAGCTAAGGTTCTTATTGATGATAACCCAAGTTATGCAATAGAGTGTGCTGAAGCTGGAATTGAAGTACTACTTTTTGATTACGAGAACTCGTATCCTTGGTCCAAGAGTGAGTCTGCTGATCAACATCCGCTGGTGACTAGAGTTAAGAACTGGGAAGAAGTGGAACAGCAAATAATGTCATTCGTAGcttcata 1007 0.4141 MASLVGCDPCSCNSKAFSQYPSLSSERSGSGCCLPFPFLRKLVYDNVSRVDKTTGFTLRSCFNINGHGNNLNFKTKGRAFGSLPRPPLLADLEDTTAKDDGRDAVLFKIDNRSLNRSPAKPLSIPNHNLSQKIVVAVDVDEVLGNFVSALNRFIADQYLSNYSVSQYHVYEFRKIWNCSREEANHRVHEFFKTPYFKSGIHPVPGAQTALQKLSRFCSLSVVTSRQNAIKDHTIEWIEENYPGLFQEIHFGNHFALNGVSRPKSEICRSLGAKVLIDDNPSYAIECAEAGIEVLLFDYENSYPWSKSESADQHPLVTRVKNWEEVEQQIMSFVAS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00459 335 Coils Coil 335 335 - -
Bva06g00459 335 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 133 330 IPR010708 GO:0008253|GO:0009264
Bva06g00459 335 Gene3D - 183 332 IPR023214 -
Bva06g00459 335 SUPERFAMILY HAD-like 122 329 IPR036412 -
Bva06g00459 335 PANTHER NUCLEOTIDASE YQFW-RELATED 48 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00459 Bva-Chr6 5336202 5340293 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00459 - - gmx:100793947 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01178 05 6114075 6117722 Bva06g00459 06 5336202 5340293 BWGD
Bva06g00459 06 5336202 5340293 Bva06g00459 06 5336202 5340293 ECH