Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01178 atgtttaaattaaagaagagCAGAGGCCCTGTGCGCTTCTTGTTACAGCAAGCTCTGCATAACAACAACCAACATCGTCTCCTCATGGCTTATTTGGCCGGCTGTGATCCCTGCTCCTGCAACAGCAAAGCCTTTTCCCCGCACCAATCTCTTTCCTCTGACCGTGGTGGTAGCAATGGCGTCGGCCTTTTATTCCCATTTCTTCGGAAGCTAGCCTATGATAATGTTATTCAGCTTAATAAAAGCGTTGGGTTTAATCTTCGAGGTTGCTCTGACATCAATGGTCATGGTAATAACTTTAGTTTCAAGACAAAGGATCGTGCTTTTGCATCTTTTCCTCGTCCGCCGTTGTTAGCTGATTTGGAGGATACTCCTGTCAGGGAGGATGGGCGTGATGCTtctctatttaaaattgataatagatCTCTAAATGGAAGTCCCACTAAACCTCTCAGTATCCCCAATCACAATTTGTCTCAGAAGATTGTTGTTGCTGTTGACGTTGATGAGGTATTAGGAAACTTCGTGTCAGCACTGAACAGATTCATTGCAGATCGATATTTGTCAAATTATTCAGTTTCTGAGTACCATGTGTACGAGTTCTTCAAGATATGGAACTGTTCACGTGATGAAGCTGATCTCCGTGTTCACGAGTTTTTTGAGACCCCATATTTCAAGTCAGGGATCCATCCTCTCCCAGGTGCTCAGACGGCCCTTCAGAAGTTATCAAGATTTTGTAGCCTATCCGTTGTAACATCTCGACAGAATGTAATCAAGAATCACACAATTGAGTGGCTAGAGAAGAATTTTCCTGGACTTTTTCAGGAGATTCACTTTGGGAATCACTTTGCTCTTGATGGGGTGTCTAGACCAAAGTCAGAGATTTGTAGGTCTTTAGGAGCTAAGGTTCTTATTGATGATAACCCAAGATATGCAATAGAATGCGCTGAAGCTGGAATTGAAGTACTACTTTTTGATTACGAGAACTCTTATCCTTGGTCCAAGAGTGAGTCTGTTGATCAACATCCATTGGTGACTAGAGTTAAGAACTGGGAAGAAGTGGAGCAGCAACTAATGTCATCCGTTGCTTCCTA 1094 0.4186 MFKLKKSRGPVRFLLQQALHNNNQHRLLMAYLAGCDPCSCNSKAFSPHQSLSSDRGGSNGVGLLFPFLRKLAYDNVIQLNKSVGFNLRGCSDINGHGNNFSFKTKDRAFASFPRPPLLADLEDTPVREDGRDASLFKIDNRSLNGSPTKPLSIPNHNLSQKIVVAVDVDEVLGNFVSALNRFIADRYLSNYSVSEYHVYEFFKIWNCSRDEADLRVHEFFETPYFKSGIHPLPGAQTALQKLSRFCSLSVVTSRQNVIKNHTIEWLEKNFPGLFQEIHFGNHFALDGVSRPKSEICRSLGAKVLIDDNPRYAIECAEAGIEVLLFDYENSYPWSKSESVDQHPLVTRVKNWEEVEQQLMSSVAS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01178 364 SUPERFAMILY HAD-like 163 360 IPR036412 -
Bva05g01178 364 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 162 358 IPR010708 GO:0008253|GO:0009264
Bva05g01178 364 Gene3D - 212 360 IPR023214 -
Bva05g01178 364 PANTHER NUCLEOTIDASE YQFW-RELATED 75 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01178 Bva-Chr5 6114075 6117722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01178 - - gmx:100793947 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01178 05 6114075 6117722 Bva06g00459 06 5336202 5340293 BWGD
Bva05g01178 05 6114075 6117722 Bva05g01178 05 6114075 6117722 ECH