Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g01109 ATGATCCTCCCCATTGTCTTCatcttttctctcctttatTCCTCCCATGCCTTGGTGCAAGATTTCTGTGTTGCAGATTATACTGCTCCAGTTGGCCCAGCAGGATACTCTTGCAAGAAGCCTGCTAAGGTCACTGCAGATGATTTTGCTTTCTCTGGCCTAGGCATTCCTGGTAACACATCAAATATCATCAAAGCTGCTGTGACCCCAGCATTTGATGCTCAGTTTCCTGGTCTAAATGGCCTTGGCATTTCAGCGGCTCGTTTAGACCTGGCCGTAGGAGGAGTTATACCACTGCATACACATCCTGCAGCTTCAGAACTTCTTATTGTCGTGCAAGGGTCAATTTGTGCTGGATTCATTGCATCCGACAACAGTGTCTACCTAAAAACTCTCAAAAGGGGGGACATTATGGTATTCCCACAAGGTTTACTGCACTTCCAAATCAATGCAGCTCCTGTTCCGGCCCTAGCAGTTGTAACCTTCAGTAGTCCGAACCCTGGTCTACAAATTCTAGACTTTGCATTGTTCAAAAGTTCTTTTCCCACTGAGTTGATAGTGAAAACCACTTTCCTTGATGAAGCTCAGGTGAAGAAGCTCAAGGGCGTTCTTGGAGGATCAGGTTA 626 0.4505 MILPIVFIFSLLYSSHALVQDFCVADYTAPVGPAGYSCKKPAKVTADDFAFSGLGIPGNTSNIIKAAVTPAFDAQFPGLNGLGISAARLDLAVGGVIPLHTHPAASELLIVVQGSICAGFIASDNSVYLKTLKRGDIMVFPQGLLHFQINAAPVPALAVVTFSSPNPGLQILDFALFKSSFPTELIVKTTFLDEAQVKKLKGVLGGSG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g01109 208 Pfam Cupin 53 198 IPR006045 -
Bva05g01109 208 CDD cupin_OxOx 15 204 - -
Bva05g01109 208 Gene3D Jelly Rolls 14 207 IPR014710 -
Bva05g01109 208 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Bva05g01109 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Bva05g01109 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Bva05g01109 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 6 204 - -
Bva05g01109 208 SMART Cupin_1_3 52 198 IPR006045 -
Bva05g01109 208 ProSitePatterns Germin family signature. 95 108 IPR019780 GO:0030145
Bva05g01109 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 6 204 - -
Bva05g01109 208 SUPERFAMILY RmlC-like cupins 17 201 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g01109 Bva-Chr5 5719974 5720914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g01109 1 207 Miscellaneous Gene Families AT5G20630 68.269 4.12e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g01109 - - gmx:100800387 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01109 05 5719974 5720914 Bva06g00533 06 5776640 5777751 BWGD
Bva05g01109 05 5719974 5720914 Bva05g01109 05 5719974 5720914 ECH