Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00460 ATGTTGGAGGGTCCATCCTATCTCTTTTCAAGGGAATTACCAAGCTCGGTTGAAGAGGAGAGCAAGTGGATTTACAACACTCATCGTGTGATGGAGCTCTCAAACAAAAAGCGCCAGCTGGAAGACGATGAGGAACCAGTGGTTTTACTGAAGTCATGTAAACTTTCAGATGCTTCCGGGGAAGGGAGTTCGCAGGTCAACGTCCATAATCTTTCTATTTCTCGGACCCAAACCAATGACCAAAATCATGCCGGGAATCAGTCCGATCCTAGTTCACTTATCATCCAGCTTGGTCGAGACATCTCAATTAATTGTCTCCTTCGATGCTCAAGGTCTGATTATGGCTCGATTACTGCATTGAACAGGAGCTTTCGAGATATCATTCGGACTGGAGAGCTGTATAAGCTCAGGCGGCTGATGGGTGTAGTCGAACATTGGGTTTACTTCTCTTGTAGTCTACTTGAATGGGAAGCATACGATCCATATAGTGGTCGATGGATGTGCTTGCCCCCAATGACTTCTAATGAATGCTTCATGTGTTCAGATAAAGAGTCATTGGCTGTTGGTACCGAGCTTCTTGTTTTTGGAATGGAAATAATGTCTCCAATCATATACCGGTATAGCATTTTAACGCACACATGGTCATCTGGCATGCAAATGAATACTCCCAGATGCTTGTTTGGTTCTGCCAGCCTTGGAGCAATAGCTATAGTAGCTGGTGGTTGTGATCCAAGTGGCAACATCTTAAGCTCAGCTGAACTTTACAATTCAGAAACTGGAACATGGACGACTCTACCAAACATGCATAAACCAAGGAAAATGTGTTCTGGTGTATTTATGGATGGGAAGTTTTATGTGATTGGTGGGATTGGAGTTGGAAACTCTGGGCACCTCACATGTGGGGAGGAGTTTGATCTCAATATAGGAAGATGGCGTGAGATGCCGAACATGTTCCCTCCGCGTGATGGGGTGGCTGGGGTGAATGAGGCACCTCCTCTTGTTGCAGTTGCAAATAATGTGCTGTATGCTGCAGATTTTGTACAGTCGGAGTTAAAGAGATATGATGAAGTCCAGAACTCATGGGCCATAATTGGAGGAATGCCCGAGAGGGCAACCTCAATGAATGGCTGGGGTGTAGCCTTTCGGGCATGTGGAGATAGGCTGATTGTTATTGGTGGCCCCAGGGGACTGGGTGGAGGGGGGCTAGAGATTAATGCTTGGATCCCAAATGAAGGTGCACCAGAGTGGAACCTGCTTGCTAGGAAGCGAACAGGGAACTTTGTATATAACTGTGCAGTGATGGGATGCTG 1310 0.4634 MLEGPSYLFSRELPSSVEEESKWIYNTHRVMELSNKKRQLEDDEEPVVLLKSCKLSDASGEGSSQVNVHNLSISRTQTNDQNHAGNQSDPSSLIIQLGRDISINCLLRCSRSDYGSITALNRSFRDIIRTGELYKLRRLMGVVEHWVYFSCSLLEWEAYDPYSGRWMCLPPMTSNECFMCSDKESLAVGTELLVFGMEIMSPIIYRYSILTHTWSSGMQMNTPRCLFGSASLGAIAIVAGGCDPSGNILSSAELYNSETGTWTTLPNMHKPRKMCSGVFMDGKFYVIGGIGVGNSGHLTCGEEFDLNIGRWREMPNMFPPRDGVAGVNEAPPLVAVANNVLYAADFVQSELKRYDEVQNSWAIIGGMPERATSMNGWGVAFRACGDRLIVIGGPRGLGGGGLEINAWIPNEGAPEWNLLARKRTGNFVYNCAVMGC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00460 436 Gene3D - 134 433 IPR015915 GO:0005515
Bva05g00460 436 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 436 - -
Bva05g00460 436 SUPERFAMILY Kelch motif 153 433 IPR015915 GO:0005515
Bva05g00460 436 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 436 - -
Bva05g00460 436 Pfam Kelch motif 271 317 IPR006652 GO:0005515
Bva05g00460 436 Pfam Kelch motif 223 268 IPR006652 GO:0005515
Bva05g00460 436 SMART kelc_smart 235 282 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00460 Bva-Chr5 2272188 2275680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00460 94 375 Miscellaneous Gene Families AT4G33900 22.623 1.89e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00460 - - gmx:100788507 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01241 06 9548080 9552292 Bva05g00460 05 2272188 2275680 ECH
Bva05g00460 05 2272188 2275680 Bva05g00460 05 2272188 2275680 ECH