Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03400 ATGCCCATCAAAACCACCGGCGGAGGCGGTTACGGTGCTGTCGCCACCGCCACCACCACAGTTATCCCCGAAGTCCCAACATCGCAATCCACCACCACGTCCTCCGATCTCTCCTTCTTCTCCCGCGCCAAGAATACGGCCCATGCTTTTCTTGCTACTCCCCGTCCATGGCGCGAGCTTTTGGACTACTCAGCCTTCTCCCGTCCCTACACTTACGCTGATGCCATGGTTCGCGTCAGACGGAACCTCAGTTACTTCCGATTTAACTACGCTTTGGTAATGCTCTTCATTCTCTTCCTTAGTCTCTTGTGGCATCCAATTTCCATGATCGTCTTCTTGATCGTTTTCGTTGCTTGGttctttttctacttctttCGTGATACCCCTGTTGTATTATTGGACCAAACTCTCGATGACCGAACGGTACTCTGTGGTCTCACTTTGGTCACGGTTGTTGCCCTTGTGTTTACTCATGTTGGGCTAAATGTGTTGCTCTCTCTAGTTATAGCGGTTCTGATTATTGGATTGCATGCGGCTTTTCGTATCACTGAGGATTTATTTCTTGATGAGGAAAGTGCTGCCCATGGTGGGCTGCTTTCGGTTGTTGGGAGTCAACCTCTTGTACCAACTTATACGAGGGTTTA 644 0.4876 MPIKTTGGGGYGAVATATTTVIPEVPTSQSTTTSSDLSFFSRAKNTAHAFLATPRPWRELLDYSAFSRPYTYADAMVRVRRNLSYFRFNYALVMLFILFLSLLWHPISMIVFLIVFVAWFFFYFFRDTPVVLLDQTLDDRTVLCGLTLVTVVALVFTHVGLNVLLSLVIAVLIIGLHAAFRITEDLFLDEESAAHGGLLSVVGSQPLVPTYTRV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03400 214 PANTHER PRA1 FAMILY PROTEIN 32 207 - -
Bva04g03400 214 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 32 207 IPR004895 -
Bva04g03400 214 Pfam PRA1 family protein 51 191 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03400 Bva-Chr4 27084467 27085605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03400 K20359 - cpap:110819332 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02824 04 24244382 24245801 Bva04g03400 04 27084467 27085605 ECH
Bva04g03400 04 27084467 27085605 Bva04g03400 04 27084467 27085605 ECH