Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02824 ATGTCGTCTTCGACATCGGCACCCCATTACAATTCTTTCCCCTCAACCTCGAATTCCAGTACTCCTTACTTTATCTCTGCCGTCAGGGCCTCAACTCAAACCATTATGGCCACGCGCCGCCCATGGGAGGAAGTCTTCGCCCTATACTCCTTCAACCGTCCGTACACTTTCGGAGAAGCCACCGTGCGAATCAAGCTCAACTTCAATCACTTTCGCATCAACTACGCACTGATCGGCCTCGTAATCCTCTTCCTAAGCCTTCTCTGGCACCCCGTCTCCATGATTGTCTTCTTGGCGGTGTTTGTCGCCTggttctttctctatttcttccGTGACGAGCCAGTGGTGGTGTTCAATCGCGTAATTGATGACCGAGCAATGTTGGCTTTTCTTGGAGTCCTGACCATTGTCGCATTGGTGTTCACCGGTGTTTGGTTGAATGTCTTGGTTTCGATTTTGGTCGGGGTTGCACTTGTGGGATTGCATGCGGCATTTAGGAGTACGGACGATTTGTATGTGGACGAGCAAGAAGTCGCCGATGGAGGCTTGGTTTCGTTTGTAGGTAGCCCTAGACGAACAGGGTACACCAGAATATA 596 0.4916 MSSSTSAPHYNSFPSTSNSSTPYFISAVRASTQTIMATRRPWEEVFALYSFNRPYTFGEATVRIKLNFNHFRINYALIGLVILFLSLLWHPVSMIVFLAVFVAWFFLYFFRDEPVVVFNRVIDDRAMLAFLGVLTIVALVFTGVWLNVLVSILVGVALVGLHAAFRSTDDLYVDEQEVADGGLVSFVGSPRRTGYTRI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02824 198 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 17 197 IPR004895 -
Bva04g02824 198 Pfam PRA1 family protein 36 176 IPR004895 -
Bva04g02824 198 PANTHER PRA1 FAMILY PROTEIN 17 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02824 Bva-Chr4 24244382 24245801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02824 K20359 - cit:102627761 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02824 04 24244382 24245801 Bva13g02747 13 20131743 20132656 BWGD
Bva04g02824 04 24244382 24245801 Bva04g03400 04 27084467 27085605 ECH
Bva04g02824 04 24244382 24245801 Bva04g02824 04 24244382 24245801 ECH
Bva05g02142 05 16210948 16211847 Bva04g02824 04 24244382 24245801 ECH