Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03192 ATGAAGCTCGAGGTCTGTCTGCTCATTGTGGCTTTTGCTGTGGTGTTTTTCACTGCTGCCGCAGATCCTGACCTTCTTCAAGACATCTGTGTCGCCGATCTCACTTCTGAGGTGAAAGTCAATGGGTTTACCTGCAAAGACGCGTCCAAAGTAAACGCCTCTGACTTCTTCTCGGATATACTAGCCAAACCCGGAACTACAAATAACACCTTTGGGTCACTGGTCACCGGAGCCAACGTACAAAAAATCCCAGGACTAAACACTTTGGGTGTCTCTCTATCTCGCATTGACTACGCCCCTGGTGGCCTTAACCCACCCCACACCCACCCACGTGCCACTGAGATAGTTTTTGTGCTTAAAGGTGAATTAGATGTGGGGTTCATAACCACTGCAAATGTGCTTATATCAAAGTCCATTAAGAAGGGTGAGGTATTTGTGTTTCCAAAAGGGTTAGTTCACTTCCAAATGAACAATGGGAAGGTGCCTGCTTCTGTAATTGCAGCCTTCAATAGTCAATTGCCTGGCACACAGTCCATTGCGACAACCTTGTTTGCTGCTACGCCAACGGTTCCAGACAATGTTTTGACAAAGGCATTCCAAGTGGGTACTAAGGAGGTTGAGAAAATTAAGTCTAGGCTTGCACCCAAGAAGTA 653 0.4671 MKLEVCLLIVAFAVVFFTAAADPDLLQDICVADLTSEVKVNGFTCKDASKVNASDFFSDILAKPGTTNNTFGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLKGELDVGFITTANVLISKSIKKGEVFVFPKGLVHFQMNNGKVPASVIAAFNSQLPGTQSIATTLFAATPTVPDNVLTKAFQVGTKEVEKIKSRLAPKK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03192 217 ProSitePatterns Germin family signature. 102 115 IPR019780 GO:0030145
Bva04g03192 217 SMART Cupin_1_3 58 207 IPR006045 -
Bva04g03192 217 Pfam Cupin 61 206 IPR006045 -
Bva04g03192 217 CDD cupin_OxOx 22 213 - -
Bva04g03192 217 Gene3D Jelly Rolls 21 215 IPR014710 -
Bva04g03192 217 PANTHER GERMIN-LIKE PROTEIN 8 215 - -
Bva04g03192 217 SUPERFAMILY RmlC-like cupins 22 212 IPR011051 -
Bva04g03192 217 PRINTS Germin signature 107 127 IPR001929 GO:0030145
Bva04g03192 217 PRINTS Germin signature 137 157 IPR001929 GO:0030145
Bva04g03192 217 PRINTS Germin signature 170 185 IPR001929 GO:0030145
Bva04g03192 217 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 8 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03192 Bva-Chr4 26024004 26025434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03192 19 217 Miscellaneous Gene Families AT3G05930 60.000 3.95e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03192 - - gmx:100302722 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03192 04 26024004 26025434 Bva13g03180 13 22243448 22244867 BWGD
Bva04g03192 04 26024004 26025434 Bva04g03192 04 26024004 26025434 ECH