Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02458 ATGCAGACGGAGCAGGCGCAGCCACAGAACCAGTTGGCAGTGCAAATTTCAGGGAGCCTCAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAGGAGATGTCAAGGTCTGCTCTCACCTCCTTCAAAGCCAAAGAGGAAGagattgaaaagaagaagatggaggTCAGAGAAAAGGTTCAGTTGCAGTTGGGTCGAGTCGAGGAAGAAACTAAGCGTCTCGCCATGATTCGTGAGGAGCTTGAAGCTTTGGCAGATCCAACGAGAAAGGAAGTTGCAGTAGTCCGGAAAAGGATTGATTCAGTAAACAAAGAGTTAAAGCCGCTAGGCCATGCATGCCAGAAGAAGGAGAAAGAATACAAAGAAGCCCTTGAAGCTTTCAACGAAAAGAACAAGGAAAAAGTACAGCTAATTACCAGGTTAATGGAGCTGGTGAGTGAAAGTGAGAGACTGAGGATGAAGAAGCTGGAGGAGCTGAGCAAGAACATAGAATCCATGCACTA 500 0.448 MQTEQAQPQNQLAVQISGSLSFSSHLSKEDEEMSRSALTSFKAKEEEIEKKKMEVREKVQLQLGRVEEETKRLAMIREELEALADPTRKEVAVVRKRIDSVNKELKPLGHACQKKEKEYKEALEAFNEKNKEKVQLITRLMELVSESERLRMKKLEELSKNIESMH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02458 166 Coils Coil 38 58 - -
Bva04g02458 166 Pfam Transcriptional activator 17 164 IPR007033 -
Bva04g02458 166 Coils Coil 112 132 - -
Bva04g02458 166 PANTHER RAB6-INTERACTING PROTEIN GORAB 7 165 IPR007033 -
Bva04g02458 166 PANTHER EXPRESSED PROTEIN 7 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02458 Bva-Chr4 22434492 22436388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02458 - - tcc:18598178 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02458 04 22434492 22436388 Bva03g02172 03 19116336 19117978 ECH
Bva04g02458 04 22434492 22436388 Bva04g02458 04 22434492 22436388 ECH
Bva04g02458 04 22434492 22436388 Bva07g02290 07 18853819 18855204 ECH