Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01959 ATGGAAAGGACGTGGATTTTGAAACTGGTTTTGTTAGTGGCTTTCATCGGCTACTTTGTTGAAGGTCTAGGAGTGAACTGGGGAACGCAGGCGACCCATAAATTGCCTCCAGACACGGTGGTTCAATTGTTGAAGAGTAATGGAATTCAGAAGGTGAAACTCTTTGATGCAGATGAGTCCACCATGAGTGCTCTGGCTGGAACTGGTATTGAAGTCATGGTTGCCATTCCCAACAATCAGCTTGCTGACATGAACGATTATGATCGAGCCAAACAGTGGGTTCGCAAGAATGTTACCCGTTACAACTTCAAGGGAGGAGTTAACATCAAGTATGTAGCAGTTGGTAATGAGCCATTTTTGAAATCCTACAATAATTCATTCTTGAATATCACTTTCCCAGCACTACAAAACATTCAAAATGCCCTTAACGAGGCTAATGTTGGAGACGCCATAAAGGCCACAGTGCCCTTAAATGCTGATGTCTATGAGTCTCCAACGAATAACCCCGTTCCATCTGCAGGAAGATTCAGGGCTGATATGAATGATCTAATGACCCAAATTGTGAAATTTCTTAACCAGAATGGTGCACCATTCACCGTAAACATATACCCTTTTCTAAGTCTTTACGGGAACgatgattttccttttgacTATGCCTTCTTCGATGGAGTATCAAATCCCATAGATGATAATGGGATACAATACACAAACGTTTTCGATGCAAATTTTGATACCTTGGTCTCTGCTTTGACAGCAGCAGGATTTGGGCAGTTGCCCATTTTGGTAGGAGAAGTAGGATGGCCTACTGAAGGTGACAAGAATGCCAATGCAGGCAATGCACTGAGATTCTACAACGGCCTTCTGCCAAGACTTGCAGCTAACAAAGGAACACCGCGCCGGTCTGGGTCCATCGAGGTTTATCTGTTTGGACTCATTGATGAGGATGCTAAGAGCATTGCTCCAGGAAACTTTGAGCGTCACTGGGGAATATTTAGGTACGATGGGCAGCCTAAGTTTGCAATAGATTTTACCGGTCAGGGTCAAAACAAGTTACCCGTAGGAGCTCAGAATGTTAAATATCTTGCTCCAACTTGGTGCACGTTCAACCCAGATGCCAAGGATCTCAGCAGACTTGCAGATAATATCAACTATGCTTGCACATATGCAGATTGCACGGCACTTGGATATGGCTCTTCTTGCAACAGCTTGGATGCTAATGGGAATGCCTCATATGCATTCAATATGTATTTCCAGGTGCAGAATCAGGATAGCAGGGCCTGCAATTTTCAAGGCTTGGCCAAGATTACTACACAGAATATTTCACAAGGCAATTGCAATTTCATTATTCAGATTGCTTCTTCATCGTCATCGTGTTTGAGATTCTCACTGGCAGCTTTCATATTTCTTACATTATCTAcgattctattttttta 1433 0.4229 MERTWILKLVLLVAFIGYFVEGLGVNWGTQATHKLPPDTVVQLLKSNGIQKVKLFDADESTMSALAGTGIEVMVAIPNNQLADMNDYDRAKQWVRKNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEANVGDAIKATVPLNADVYESPTNNPVPSAGRFRADMNDLMTQIVKFLNQNGAPFTVNIYPFLSLYGNDDFPFDYAFFDGVSNPIDDNGIQYTNVFDANFDTLVSALTAAGFGQLPILVGEVGWPTEGDKNANAGNALRFYNGLLPRLAANKGTPRRSGSIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFAIDFTGQGQNKLPVGAQNVKYLAPTWCTFNPDAKDLSRLADNINYACTYADCTALGYGSSCNSLDANGNASYAFNMYFQVQNQDSRACNFQGLAKITTQNISQGNCNFIIQIASSSSSCLRFSLAAFIFLTLSTILFF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01959 477 Pfam Glycosyl hydrolases family 17 23 343 IPR000490 GO:0004553|GO:0005975
Bva04g01959 477 SUPERFAMILY (Trans)glycosidases 23 343 IPR017853 -
Bva04g01959 477 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 462 - -
Bva04g01959 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Bva04g01959 477 Gene3D Glycosidases 22 350 - -
Bva04g01959 477 Gene3D - 360 459 - -
Bva04g01959 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 462 IPR044965 GO:0004553|GO:0005975
Bva04g01959 477 Pfam X8 domain 364 433 IPR012946 -
Bva04g01959 477 SMART X8_cls 364 447 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01959 Bva-Chr4 19713520 19716878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01959 6 453 Miscellaneous Gene Families AT1G64760 75.223 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01959 - - gmx:100815300 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01959 04 19713520 19716878 Bva03g00172 03 1069017 1072604 BWGD
Bva04g01959 04 19713520 19716878 Bva04g01959 04 19713520 19716878 ECH