Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01922 ATGCTATCTATTTCTGCGGAAAGGTTTAGAAGAAAACTGAAGCCAAAGCATGGGACTTTCATGCAATTTGAATTTCAGCTGGAGCAGCTAAACAACGGAATCCTTCATCTAGCCAATCATTTAATAATTGTTTGCTTAGAACCTATCATGTCATCTGCGCCAGCACGAATTGGAAGACATCGACAGCGTTATGAAGACAATTTGCGCCTGGTCTCTGGATGCATTCCCTATAGATGGAGAAAGGAGAACAAATATGAAGATGGGGAGGGAGATGCAGAAGACAAAATAGAAGTTCTTATGGTTTCTTCTCCAAATCGTGATGACCTTGTATTTCCAAAGGGTGGATGGGAAAATGATGAGACTGTTATAGAGGCTGCTTGCCGTGAAGCATTAGAGGAAGCAGGAGTGAAAGGAATACCAAGAgAAATTCCCTTAGGAAAGTGGGAGTTCAGAAGCAAAAGCAGTCAAGACATATGCAGCCTGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTAGAGGTGACTGAGGAACTTGAGACATGGCCAGAACAGAAAAACCGCGATCGGCATTGGTTGAGCATAAGAGAGGCATTTAGACTCTGCCGGTACGAGTGGATGCGTAGAGCACTGGAGGAGTTTCTTAGAGTTATGGCAGAGGACAGAAATATCAACAAGGAAGACGAGATAGTTGATTCTCCTTCAATTTCTGTTTCAAATGTGTCAGAGTGCCAAATCATGGCATCTAACAGCTACAAAAGGCCCTCCACCACTCAACACATTATAGGTTTCAGTAATGAATCAATGGATCCCAACAGCCAAGGAAAAAGCAGAAAAGTAAACGACGTCGCTCTTGTTTGCTTCTCAAGAGGTAGTCCTTCACTTTGGCTGTTGGCATCCTCTGTACCCCTTGTGCAGTA 917 0.4373 MLSISAERFRRKLKPKHGTFMQFEFQLEQLNNGILHLANHLIIVCLEPIMSSAPARIGRHRQRYEDNLRLVSGCIPYRWRKENKYEDGEGDAEDKIEVLMVSSPNRDDLVFPKGGWENDETVIEAACREALEEAGVKGIPREIPLGKWEFRSKSSQDICSLEGGCRGYMFALEVTEELETWPEQKNRDRHWLSIREAFRLCRYEWMRRALEEFLRVMAEDRNINKEDEIVDSPSISVSNVSECQIMASNSYKRPSTTQHIIGFSNESMDPNSQGKSRKVNDVALVCFSRGSPSLWLLASSVPLVQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01922 305 ProSitePatterns Nudix box signature. 114 135 IPR020084 GO:0016787
Bva04g01922 305 Pfam NUDIX domain 97 213 IPR000086 -
Bva04g01922 305 ProSiteProfiles Nudix hydrolase domain profile. 67 214 IPR000086 -
Bva04g01922 305 SUPERFAMILY Nudix 69 224 IPR015797 -
Bva04g01922 305 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 55 216 - -
Bva04g01922 305 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 50 242 - -
Bva04g01922 305 CDD Nudix_Hydrolase_9 70 207 - -
Bva04g01922 305 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 50 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01922 Bva-Chr4 19510987 19514715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01922 K07766 - gmx:100794003 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01922 04 19510987 19514715 Bva03g00208 03 1276850 1280530 BWGD
Bva04g01922 04 19510987 19514715 Bva04g01922 04 19510987 19514715 ECH