Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00208 ATGTCATCTACGCCAGCACGAATTGGAAGACATCGACAGCGTTATGAAGACAATTTGCGCCTTGTCTCTGGATGCATTCCTTATAGAttgagaaatgaagagggAGACGCCGAGGATACAATAGAAGTTCTTATGGTTTCTTCACCAAATCGTGATGACCTTGTATTTCCAAAGGGTGGATGGGAAAATGATGAAACTGTTATACAGGCTGCTTGCCGTGAAGCATTAGAAGAAGCAGGAGTGAAAGGAATACCAAGAgaAATTCCCTTAGGAAAGTGGGAGTTCAGAAGCAAAAGCAGTCAAGACATATGCAGCCTGGTAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTAGAGACCTGGCCAGAGCAGAAAAATCGTGATCGCCAATGGttGAGCATAAGAGAGGCATTTAGACTCTGCCGGTACGAGTGGATGTGTAGAGCACTGGAGGAGTTTCTTAGAGTTATGGCAGAGGACAGAGAGGTTAACAAGGAAGACTGTATGGTTGATTCTCCTTCAAGTTCAGTTTCTGAATGCCAAATCATGGCATCCAACGGCTACAAAATGCTCTCCGCCACTCAACACCTTGGCACGCCTAATCTCCTGTCGTTTAATTCTCAAGAGGTAGCCCTTCACTATGGTTGTTG 665 0.4436 MSSTPARIGRHRQRYEDNLRLVSGCIPYRLRNEEGDAEDTIEVLMVSSPNRDDLVFPKGGWENDETVIQAACREALEEAGVKGIPREIPLGKWEFRSKSSQDICSLVGGCRGYMFALEVTEELETWPEQKNRDRQWLSIREAFRLCRYEWMCRALEEFLRVMAEDREVNKEDCMVDSPSSSVSECQIMASNGYKMLSATQHLGTPNLLSFNSQEVALHYGC 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00208 221 ProSitePatterns Nudix box signature. 59 80 IPR020084 GO:0016787
Bva03g00208 221 ProSiteProfiles Nudix hydrolase domain profile. 18 159 IPR000086 -
Bva03g00208 221 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 185 - -
Bva03g00208 221 CDD Nudix_Hydrolase_9 21 151 - -
Bva03g00208 221 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 185 - -
Bva03g00208 221 SUPERFAMILY Nudix 7 161 IPR015797 -
Bva03g00208 221 Pfam NUDIX domain 36 148 IPR000086 -
Bva03g00208 221 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 6 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00208 Bva-Chr3 1276850 1280530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00208 K07766 - gmx:100780722 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01922 04 19510987 19514715 Bva03g00208 03 1276850 1280530 BWGD
Bva03g00208 03 1276850 1280530 Bva03g00208 03 1276850 1280530 ECH