Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01886 ATGGGCTTGCCACAGATACCCTTGACTGAAACTACCGAAAACATTGCAACACTGCCATTTAGTGCAGTTTTGCACAGCCCAACACGGTTTCCTGATGCAAGCTCGTCTGAGATGAACAGCGTGCACAGTGCAAATGCTACTGGATTGGTTGCATATCCTCTAGGATCCTATTATGGTGATTTTCCAAAGAAGGCTTCcttagaaatttcaaatgttTCCAATAATACATTTAATTGTAGAGGAGCATTGGAAGTTACTTCCAATGTCCATAGTCTGAAGATAGGTACATCAGATAGAAGTGGTTGTTTCCATtcaaaaaatggacgaaatatTCATATCCCTGCTTCTAGGGTTGTGGGTTTTGAATTAGACCAAGCAAGTTCTTTAACTAATGGGTCAATTAATGTTCCTGCTGCTAATCTTGATTCCTCTGCTTATGATGATGGCACATCTAATGATGCCGAACCTGCCAATTCTCTGGTCAGGAAGCGACTGCTGTCACCTCTGAGCAGTGTGCTCTCCCCAAGCTATTTCAAGGGTGATCCTCTTGACATTGGCTGCAGAAATATTGAGATAGGCTCCCTTTCTAAAAATGATAACATCAGAGATTCTATTTCACAAGATAAGAAGAAGGCAAATATTGGAAGTAGAAACAGTTACACCATGCCTTCTTGGTCCTTTTCAAGCTGCTTGGAACCAAAAAGCACATCATGTAGTGTAGAATCTAGTTTTCCATATGATGGCCCTTTGCTGGAAAATAGAAGACTGGTATCCCATAATAGTTCATCCAAGGCTGAAATTGATCACTTCAGAGAATTAAGTCATGCAAGGTCCCAGAGTAATGCAGCGTCCATATCTCCTGTAAAGGTGAACTCACCTGCACTTTCCCTCTCACCTCTAGGTCCTAAGTTTTCTGAAAGGATGAAAACCCCTGGAGGATGTAGAATATTAAGGAGTATGGAGCAATCGCTTGACAAATCTGACTCATGTCCTATGTTAATTCCTAAAGAAGATAAGTCAAGAATTGCGAGTAAATCATTTGAAGATGTTGATATCTTTTGCAATGACTTCTGTCCATCTTCTCTGGATGAAACTGGTGACTTAAGTTGGCCACTATCTCAAGAATTTGTCCTCTCCTCTCAGTCTATGAGGTTCACTAGAAGTTTGAGTGGGCTTCCAGTCAGGAGGTCATTGGTTGGCTCATTTGAGGAGTCTCTTTTATCTGGCCGGTTCTTATCTGGAGACCACAGTAAGAGAATTGATGGTTTTCTAGCTGTGCTAAGTATTTCTGGGGGGAAGTTTTCTCCTAAATCGCAGAAGCTTCCTTTTTCAGTAACCAGTGTGGATGGAGATAGCTGCCTACTGTATTATTCATCAATAGATCTAGCTGGAAATTCTTCATCAAACAAATATGGAGGCCAACAACAGAAACCGGGGCTTAGCGATGAGGATTCACAAGTTGTCAAAAGCCGCTTGCGTATCCCTATGAAAGGGCGCATACAGCTGGTGCTAAGCAATCCTGAAAAGACTCCTCTGCATACTTTCCTTTGCAAATATGATTTGAGTGACATGCCCGCTGGTACCAAAACACTCTTGCGCCAGAAAGTCACCCTTGAATCCTCCAACTCAACTTCCCCTCTATTGAAACAAGGGCTGGGGGTCTTGGACAATGGAACCATAGATAGCGGGATTCCAGCAGTACAAAAGAGTTGCCCCATGCCATTTAGCAGAGAAGCAATGCACACAGATGCACTTCACATTGTGAACGAAACAGAATCTATAAATCAGAGAAATGGGAAGGGCTCAAGCTTTGATGATTTTCCAAAGAAAGAGGATCTGCCCAAGCTAACTCAGAACGGGAAAACACAGGAAAATTCTTTCCTAGTAAAGGATAGACAAGGACAGTACTGTCATAAAGAATGTGATGAATCTGGGAAATCCTTAAATGCTTGTTTAAAGGTTAAGGACACTAATTGTGCCGGTTCACTTCGCTATGCTCTTCACCTCCGCTTCATATGCCCATTTCCTAAAAGGCCTACTAGATCAGCTCAAAGCCTCAGATCTAATTCTCTTCCAGAAAAATCTGGATTTGACATGGATGGGGAGCGCAGACTCTACTTATATAATGACTTGAGGGTTGTGTTCCCTCAACGACATTCAGATTCTGATGAGGGCAAGTTGAAAGTGGAATACCATTTTCCTGAAGATCCAAGATATTTCTCCATCAACTG 2231 0.4169 MGLPQIPLTETTENIATLPFSAVLHSPTRFPDASSSEMNSVHSANATGLVAYPLGSYYGDFPKKASLEISNVSNNTFNCRGALEVTSNVHSLKIGTSDRSGCFHSKNGRNIHIPASRVVGFELDQASSLTNGSINVPAANLDSSAYDDGTSNDAEPANSLVRKRLLSPLSSVLSPSYFKGDPLDIGCRNIEIGSLSKNDNIRDSISQDKKKANIGSRNSYTMPSWSFSSCLEPKSTSCSVESSFPYDGPLLENRRLVSHNSSSKAEIDHFRELSHARSQSNAASISPVKVNSPALSLSPLGPKFSERMKTPGGCRILRSMEQSLDKSDSCPMLIPKEDKSRIASKSFEDVDIFCNDFCPSSLDETGDLSWPLSQEFVLSSQSMRFTRSLSGLPVRRSLVGSFEESLLSGRFLSGDHSKRIDGFLAVLSISGGKFSPKSQKLPFSVTSVDGDSCLLYYSSIDLAGNSSSNKYGGQQQKPGLSDEDSQVVKSRLRIPMKGRIQLVLSNPEKTPLHTFLCKYDLSDMPAGTKTLLRQKVTLESSNSTSPLLKQGLGVLDNGTIDSGIPAVQKSCPMPFSREAMHTDALHIVNETESINQRNGKGSSFDDFPKKEDLPKLTQNGKTQENSFLVKDRQGQYCHKECDESGKSLNACLKVKDTNCAGSLRYALHLRFICPFPKRPTRSAQSLRSNSLPEKSGFDMDGERRLYLYNDLRVVFPQRHSDSDEGKLKVEYHFPEDPRYFSIN 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01886 743 PANTHER GH03947P 1 742 - -
Bva04g01886 743 Pfam Chromosome segregation during meiosis 663 742 IPR033473 -
Bva04g01886 743 Pfam Domain of unknown function (DUF4210) 398 444 IPR025261 -
Bva04g01886 743 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 1 742 - -
Bva04g01886 743 SMART DUF4210_2 398 457 IPR025261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01886 Bva-Chr4 19291892 19297245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01886 - - gmx:100819038 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01886 04 19291892 19297245 Bva04g01886 04 19291892 19297245 ECH
Bva03g00252 03 1533311 1538839 Bva04g01886 04 19291892 19297245 ECH